Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 839

>Boschl.CG.Botznik2013.chrUn.g15596.01.p
MARALATITNVLTHPDCVTIRAISAETIERKPGYITRHTDGDAISSCIELQLCNNTKTDI
TLECTLLTKQSYFQLDETNAATIAPSEKGNVTVRPKEEGEVQTTALEITVVKANGETEKI
IRYLKFGGSDDTDETEDTKQRFNKVHQYKPYFPFDHCELGKRPDTPYRNNLKMEWPLHGR
DVPNGLRNAINRGVFSFPSEYHTENEKRLRHDLFDSLTMSNYKKRFAMLLHMEKCQSEKD
IKQYDMRNASLVRSGDLLYLEVPGLAENRPSVIVGDIVHVRPLTSLGRLEEFPGDVHCVE
RGWVGLRFSHSLWAKYRTYQKYYVRFSLNPLTLWLMHRSSENIVLREDASQILFPLVPAA
KDNGNKTGSSVTLVNTLIEENLEQKKAIEMIVSGDTAKVFIIYGPPGSGKTITLVEAILQ
LLRSGTAGHILVCAPSNSACDLMTTRLLKHVDKTKVFRMHAPSRSWNDIPEDVRRASNYN
NGAFYFPPKEILMQYPIVVSTLFTTGRVASAKFPEYHFTHVFIDEAGQASEPEIMIALAG
VMAEDGKLVMAGDPKQLGPVVRSSLARTNGLQISFLERLMNTSKVHKKVNGHYDPTAVVQ
LLKNYRSHESIIEIPNKLFYDNELQVSADRSMRYSMTQWEHLPKRGFPLIFHGVQGDDRQ
ELHSPSYFNLEEAKLVKMYVKYLLSSHVEAEQIGVISPYRLQVTKIRQDLEAEIKVGCVE
EFQGQERLAIIISTVRSNNKFRPHDVKFDLGFLRNPKRFDVAITRAKALLIIIGNPRILC
FDKYWRSILEYCIDNGGYTGIRFDIRDERYRLKNVEKSLEKLALDGGNAGSEIRQMNSE

Nucleotide sequence

Length: 2,520

>Boschl.CG.Botznik2013.chrUn.g15596.01.t
AATGGCACGAGCTCTGGCGACGATTACAAACGTGTTAACACACCCTGACTGTGTTACTAT
CCGGGCTATCAGTGCAGAAACTATAGAGAGGAAGCCGGGATATATCACAAGACACACTGA
TGGCGATGCAATTTCGTCCTGCATAGAATTACAGCTGTGCAATAACACTAAGACCGACAT
CACATTGGAGTGTACGCTGCTTACAAAACAGAGTTACTTTCAATTGGACGAGACGAATGC
AGCGACGATAGCACCATCCGAGAAGGGGAATGTCACCGTGCGGCCAAAGGAAGAAGGTGA
AGTTCAGACGACTGCCTTGGAAATTACGGTCGTAAAGGCAAACGGGGAGACGGAGAAAAT
TATCAGATATCTGAAATTCGGCGGTAGCGACGACACCGACGAGACCGAAGATACGAAACA
GCGGTTTAATAAGGTTCACCAATACAAGCCGTATTTTCCATTTGATCACTGTGAACTGGG
AAAAAGACCGGACACTCCGTACCGAAATAATCTGAAAATGGAATGGCCATTGCATGGCCG
CGATGTTCCAAACGGATTGAGAAATGCTATCAACCGCGGTGTGTTCTCATTTCCCAGTGA
GTATCACACCGAAAACGAAAAGCGACTTCGACATGATCTGTTCGATTCACTGACGATGTC
AAACTACAAAAAACGCTTCGCCATGCTTCTGCATATGGAAAAATGCCAGAGTGAGAAAGA
TATAAAGCAATACGATATGAGGAATGCAAGTCTGGTAAGAAGCGGTGATTTATTATACTT
GGAAGTACCGGGACTTGCGGAAAACAGACCATCGGTTATAGTCGGAGACATAGTCCACGT
TAGACCACTGACTAGTCTTGGACGCTTGGAAGAATTTCCAGGAGATGTGCATTGTGTCGA
GCGAGGCTGGGTTGGGTTGAGATTCTCGCACAGTCTATGGGCGAAGTATCGGACATATCA
AAAGTATTACGTTCGGTTCAGTCTCAATCCCTTGACACTATGGCTGATGCATCGATCGTC
AGAAAATATAGTGCTGCGTGAGGATGCCTCGCAAATCCTGTTCCCTTTGGTCCCTGCAGC
AAAGGACAACGGGAATAAGACTGGCTCGTCTGTAACACTCGTCAATACTCTAATCGAAGA
GAATCTGGAGCAAAAGAAAGCTATCGAGATGATTGTTTCGGGTGACACGGCGAAAGTATT
CATCATTTATGGACCGCCGGGTAGCGGAAAAACCATAACATTGGTAGAAGCGATACTTCA
ACTACTCAGGTCTGGTACAGCGGGGCATATTCTCGTGTGCGCACCATCGAACAGTGCTTG
CGATTTGATGACCACAAGATTGTTAAAGCATGTTGATAAGACAAAAGTCTTTCGGATGCA
CGCCCCGTCTCGCAGTTGGAACGACATCCCCGAAGATGTCAGACGGGCATCTAATTACAA
CAACGGCGCATTCTACTTTCCACCAAAAGAAATATTGATGCAGTATCCCATCGTCGTCTC
AACCCTGTTTACAACGGGGCGAGTCGCCTCAGCAAAATTTCCCGAATATCATTTCACACA
CGTGTTCATCGACGAGGCCGGACAAGCTTCGGAGCCGGAGATTATGATAGCCCTGGCCGG
TGTGATGGCGGAAGATGGTAAACTGGTAATGGCGGGCGATCCTAAACAATTGGGACCTGT
CGTGCGATCCTCGTTGGCAAGAACAAATGGATTACAGATATCGTTTTTAGAACGTCTGAT
GAACACCAGCAAAGTGCACAAAAAAGTAAACGGACACTACGATCCAACTGCTGTAGTACA
ATTACTGAAAAACTATCGTTCTCATGAATCGATAATCGAAATTCCGAACAAGCTGTTTTA
CGACAATGAGCTACAAGTATCTGCGGACAGATCGATGCGTTATTCCATGACTCAATGGGA
GCACCTTCCCAAACGCGGATTCCCATTGATATTCCACGGTGTTCAAGGCGACGATCGGCA
AGAGTTGCACAGCCCTTCGTACTTTAATTTGGAAGAAGCCAAGCTCGTAAAGATGTACGT
AAAATATCTTCTATCCAGCCATGTTGAAGCTGAGCAGATTGGCGTGATATCTCCGTATCG
TCTCCAAGTCACGAAAATCCGCCAAGATTTGGAAGCGGAGATAAAGGTCGGTTGCGTCGA
GGAGTTTCAAGGTCAAGAGAGGCTCGCAATCATCATCAGCACAGTAAGAAGCAACAATAA
GTTTCGGCCGCACGACGTGAAGTTCGATCTGGGTTTTCTGCGTAATCCGAAGCGTTTTGA
CGTGGCAATAACACGAGCCAAGGCGCTGTTGATCATAATCGGCAATCCCAGAATTCTATG
CTTCGATAAATATTGGAGATCGATTCTGGAATATTGCATCGACAACGGCGGATATACGGG
GATCAGGTTCGACATACGCGACGAGAGATATCGTTTAAAGAATGTGGAGAAGTCTCTGGA
GAAACTGGCGCTCGATGGTGGAAACGCAGGATCGGAGATTCGCCAGATGAATTCAGAGTA

InterProScan

PANTHER	MOV-10 (IPR026122) - T[49-823] 2.5E-176
SMART	Helicase_ATP-bd (IPR014001) - T[376-574] 0.0018
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[378-788] 6.59E-61

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MOV10_HUMAN	41.53 %	499	1.3E-162
M10L1_HUMAN	47.285 %	360	1.99E-108
RENT1_HUMAN	31.797 %	182	2.41E-47

Transcript Model

Transcript Id

Possible name(s)

Gene model

Location

Amino acid sequence

Nucleotide sequence