- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g15026.01.t
Possible name(s)
HNRNPDL; NCL; RBM39
Gene model
Location
chrUn [97,021,244 / 97,024,007]
Amino acid sequence
Length: 215
>Boschl.CG.Botznik2013.chrUn.g15026.01.p
VEEAERKGERGDGTRDRDNSDRDARTMFVKNLPYHASEDDLMGLFENVEEVRLLSDRDTG
RSKGIAFVQFNDAGGLDKAMESKDEYELEGRQLLVDYTDSRSQRSARGGNQGGRGGRGGR
GGGQGGSAPSKTLFVKGVTEDMSRDDLAKYFEDASDVRMITDKETGKNKFFAYIEFNDEQ
AAKKCYQSAKGGIEGDDTTFYVDFARERGNDRNSG
Nucleotide sequence
Length: 647
>Boschl.CG.Botznik2013.chrUn.g15026.01.t
GTGGAAGAAGCTGAACGCAAGGGCGAACGAGGTGATGGCACGAGAGACCGAGACAACAGC
GACAGAGACGCCAGAACGATGTTTGTAAAAAACCTACCCTACCACGCGAGCGAGGACGAT
TTGATGGGGCTCTTTGAAAATGTTGAAGAAGTCAGACTGCTATCGGACCGGGACACCGGA
AGATCCAAAGGGATCGCTTTTGTTCAATTCAACGATGCCGGCGGTCTCGATAAAGCGATG
GAGTCGAAAGACGAGTACGAACTGGAGGGCCGTCAATTGCTTGTCGATTACACGGACAGT
CGCAGCCAGAGATCCGCCCGAGGTGGCAACCAGGGCGGTCGCGGTGGTCGTGGAGGCCGC
GGCGGTGGTCAAGGTGGATCAGGCCCTTCGAAGACTCTCTTTGTCAAGGGCGTGACGGAA
GACATGAGCCGCGACGATTTGGCGAAATACTTTGAAGACGCCTCTGACGTGCGTATGATC
ACCGACAAGGAAACCGGAAAGAACAAATTGTTTGCTTACATCGAATTTAATGACGAGCAG
GCAGCCAAGAAATGCTACCAGTCGGCCAAGGGCGGCATCGAAGGCGACGACACCACTTTC
TACGTGGATTTCGCCAGGGAACGCGGTAACGACCGCAACAGCGGCGG
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-113] 1.6E-24 - T[118-215] 3.3E-18 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[17-126] 8.87E-29 - T[103-204] 3.63E-17 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[25-100] 17.575 - T[131-207] 13.464 |
| SMART |
RRM_dom (IPR000504) - T[26-96] 5.9E-20 - T[132-203] 4.1E-14 |
| Pfam |
RRM_dom (IPR000504) - T[28-93] 7.2E-15 - T[133-191] 6.3E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NUCL_HUMAN | 32.447 % | 101 | 8.57E-25 |
| RBM39_HUMAN | 30.508 % | 75.9 | 4.77E-16 |
