Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 726

>Boschl.CG.Botznik2013.chrUn.g14835.01.p
MPRSAPKGPAPAISHICCNDCGAQDANWASVNHGVVMCNDCASVHMQLGRHVSQVKHMQK
SHWPPNLLLMVQHLVSSGANSIWEHCLLDPAQVRSGKRKPNPNDVIHPTKWDFIKAKYMN
SSYVHRMPNGEADISKQLHSLVRTSNLETSLRLLSHGAHTDYINPEKGDTPLHVAARYGQ
SLQVELLVVYGADPGVKDVNGRTAEDLARAQNHNELADRLVELQYELSDKIAAWACGDVP
DHKSGRHYMVPKIKGPTRASQDGKKRLGGLSNQMFEVLAMDVYDEVERRELEKIWLEVQK
NVVIISRGGSAPTQTEVVPFLPVHPEYSPTRNQGRQKLAHFKDAELNSLVCDLMCEIVRR
EQVYDSVTPIPEEEPIYDIPPEEDDAPPRVPLERAAIRVEHTPPPVDTVRREEYETLKEE
LREKNTEILKLREQNRELSDKVTNLAKENCKLKNQFKRINDRKGDSVMPTRRDRKTMITG
DSRASLTSVHSGGSNDRRNTIHDLPNQDAEGSRGSSQYDNSPSKDDVTASSAADKPPDDN
QKARKRSTSANTNGSNNKTPTTDLENDISDTTNPENPESGRSSATSDSPKSPVEPDELIW
PDKTELKAKMDALTKMIQNLVLMARSKKSDSYLECAENIVSAVSDVVGLFERPQHPDIKP
TIQRLVGSAQKLKSRCRENLEQTAAGNAGRPFTDEIIAYAREIVTAEKQLVVMESKDEDA
DLGSAI

Nucleotide sequence

Length: 2,181

>Boschl.CG.Botznik2013.chrUn.g14835.01.t
TGCCCAGAAGCGCGCCGAAAGGTCCCGCCCCCGCGATATCGCACATTTGCTGCAACGACT
GCGGCGCCCAGGACGCCAACTGGGCGTCCGTAAACCACGGTGTCGTCATGTGCAACGACT
GCGCCAGCGTGCACATGCAGCTCGGCCGTCACGTGTCGCAAGTGAAACACATGCAGAAGA
GCCACTGGCCGCCGAATCTACTTCTCATGGTGCAGCACTTGGTCTCTTCCGGGGCTAATT
CGATATGGGAGCACTGCCTGTTGGACCCGGCTCAAGTACGCAGCGGGAAAAGAAAACCAA
ACCCCAACGACGTGATACACCCCACAAAGTGGGACTTTATTAAGGCAAAGTACATGAATT
CGTCTTACGTACACCGCATGCCGAACGGAGAAGCTGACATCAGCAAACAGCTACACTCGT
TAGTGAGGACAAGCAACTTAGAAACAAGTCTTAGATTGCTGTCGCATGGTGCACACACAG
ATTATATAAACCCGGAGAAAGGCGACACACCTTTACATGTTGCTGCAAGGTACGGGCAAA
GCCTACAAGTGGAATTACTGGTAGTTTACGGTGCTGATCCTGGGGTTAAAGATGTAAACG
GGCGTACAGCGGAAGACTTGGCACGCGCTCAAAATCACAACGAGTTGGCAGACCGTCTTG
TCGAGTTACAGTACGAATTATCGGATAAAATCGCTGCATGGGCGTGTGGGGATGTTCCCG
ATCATAAATCCGGCAGGCACTATATGGTTCCGAAAATAAAAGGGCCTACGCGCGCCAGTC
AGGATGGGAAAAAGAGACTCGGCGGTCTCAGCAATCAAATGTTTGAAGTGTTGGCGATGG
ACGTGTACGACGAAGTGGAACGCAGGGAGCTGGAGAAAATCTGGCTGGAAGTCCAAAAAA
ACGTGGTGATCATCAGTCGCGGCGGGTCCGCGCCCACGCAGACCGAGGTGGTGCCTTTTC
TGCCTGTGCATCCCGAGTATTCGCCGACGCGAAACCAAGGTCGTCAGAAGCTCGCGCATT
TTAAAGACGCGGAGCTCAACAGCCTGGTGTGCGATTTGATGTGCGAGATTGTGCGTCGCG
AACAGGTTTACGACAGCGTCACTCCCATACCCGAGGAAGAGCCTATTTACGATATACCTC
CGGAAGAGGATGATGCTCCACCACGAGTTCCTTTAGAACGCGCAGCAATACGCGTTGAAC
ATACGCCTCCGCCAGTAGACACTGTGCGCAGAGAGGAATACGAAACTTTGAAAGAGGAAC
TGAGAGAGAAGAACACGGAAATACTGAAGCTGCGCGAGCAGAACCGCGAGCTGAGCGACA
AAGTCACGAACTTAGCGAAAGAAAATTGCAAGCTCAAGAACCAGTTTAAGCGCATCAACG
ACCGAAAAGGCGACAGCGTCATGCCCACCCGTAGAGATCGGAAAACAATGATTACCGGAG
ACTCGCGGGCCAGCTTGACTTCGGTGCATTCGGGCGGAAGCAACGATCGAAGGAATACTA
TCCACGATTTACCCAATCAGGACGCCGAAGGCTCGCGAGGCAGTAGCCAATACGATAACA
GCCCGAGCAAAGATGATGTGACAGCGTCTTCCGCAGCAGATAAGCCGCCCGATGATAATC
AGAAGGCGCGTAAACGTAGCACTAGTGCAAACACAAACGGGAGCAATAATAAAACGCCGA
CCACCGACCTGGAAAATGACATCTCTGACACAACCAACCCGGAAAATCCGGAGAGCGGAC
GCAGTAGCGCGACCAGCGACAGTCCGAAATCGCCGGTCGAACCTGACGAATTGATCTGGC
CCGATAAGACTGAATTGAAAGCGAAAATGGACGCGTTGACCAAAATGATACAGAATCTAG
TATTGATGGCACGCAGCAAAAAGAGCGATTCCTATTTAGAGTGCGCGGAAAACATTGTAT
CCGCCGTGTCCGACGTGGTTGGGCTTTTCGAGAGGCCGCAGCATCCGGACATCAAGCCCA
CGATTCAGCGATTGGTGGGCAGCGCGCAGAAGTTGAAGAGCAGGTGCAGAGAGAATTTGG
AGCAGACCGCGGCGGGCAATGCCGGCAGGCCGTTTACGGACGAGATCATCGCGTACGCGA
GAGAAATCGTGACTGCCGAGAAGCAGCTTGTCGTGATGGAGTCCAAAGATGAAGACGCAG
ACTTGGGGTCTGCGATATGAA

InterProScan

ProSiteProfiles	ArfGAP_dom (IPR001164) - T[1-131] 18.339
SMART	ArfGAP_dom (IPR001164) - T[3-131] 2.3E-13
Gene3D	ArfGAP_dom_sf (IPR038508) - T[13-129] 1.6E-27
PRINTS	ArfGAP_dom (IPR001164) - T[15-34] 5.9E-6 - T[34-51] 5.9E-6
SUPERFAMILY	ARFGAP/RecO (IPR037278) - T[17-127] 7.19E-23
Pfam	ArfGAP_dom (IPR001164) - T[17-125] 7.5E-21
Gene3D	Ankyrin_rpt-contain_sf (IPR036770) - T[130-233] 2.2E-16
SMART	Ankyrin_rpt (IPR002110) - T[133-162] 4200.0 - T[167-196] 0.059 - T[200-229] 1000.0
SUPERFAMILY	Ankyrin_rpt-contain_sf (IPR036770) - T[137-223] 1.09E-17
ProSiteProfiles	Ankyrin_rpt-contain_dom (IPR020683) - T[138-222] 20.208
CDD	Ankyrin_rpt-contain_dom (IPR020683) - T[138-221] 2.29721E-16
ProSiteProfiles	Ankyrin_rpt (IPR002110) - T[167-199] 12.77
Pfam	GIT_SHD (IPR013724) - T[263-290] 8.5E-10
SMART	GIT_SHD (IPR013724) - T[263-293] 9.0E-5 - T[334-364] 0.13
Pfam	GIT1_C (IPR022018) - T[601-712] 2.7E-20