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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S4...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S64...' > 
  3. Transcript 'KH2012:KH.C1.1031.v1...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g14793.01.t

Possible name(s)

PKD1; PKD2; PKD2L1

Gene model

Boschl.CG.Botznik2013.chrUn.g14793

Location

chrUn [95,585,404 / 95,590,471]

Sequences

Amino acid sequence

Length: 538

>Boschl.CG.Botznik2013.chrUn.g14793.01.p
VLYWGQEHMYDDSGYSQYIDQSTSVSDVQGNLTSLQEQNWIDRDTRVLFVEFTQLNQATY
WFTVCVIMFEIGVTGAVIPSHTIQTVRVFVPGTSFYVDMLFMSFIGLILIYLILHELRKT
RDPDMSVNAYFTKWTNWLNLSVILFTIALCVFYIYKQVYMDEVTKEYISDKSAFTNFFKI
AFFTDIVTIFACLLLFLLMLRATRLFRFFKCWSAFGETISASAGYLAGATLMLMGWILGF
AALGFLVYGQSYTQIVPDFRDFPNSIYTMFRVFRGRFDVRTCFEYSPFFTIFFFFTYYIG
VFYIFCRLFAAILINEYKFSRGRKSHLRMEILDYEILDHLIARIKLRLGIIKPKEYRPTV
RFEGMSTPSSRGSFMSLDSFDTYSFFPGRISQCSYATGISASSSDSGFGTPSDHSISVYD
YLTLDQPSDTPMDTQHLDYLYDRLSNYSVDMMLHRFERVSVLTSEVSEMESNAVKLSIIK
KQQALLQSQAKEIATAASSVTVQPNFVPEPEDRRPQGSASKRNDILYLPVIIREYTIA

Nucleotide sequence

Length: 1,618

>Boschl.CG.Botznik2013.chrUn.g14793.01.t
GTACTGTACTGGGGCCAGGAGCATATGTACGACGACTCGGGATATTCTCAATATATCGAC
CAGTCGACGTCAGTGAGTGACGTTCAAGGCAACCTCACTTCTCTACAAGAACAAAATTGG
ATCGACAGAGATACGAGAGTTCTGTTTGTCGAGTTCACGCAGTTGAACCAAGCTACATAC
TGGTTCACTGTATGTGTGATCATGTTTGAAATTGGAGTGACTGGAGCAGTTATACCATCT
CATACAATACAGACTGTGCGTGTCTTCGTGCCCGGTACTTCATTCTATGTTGACATGCTA
TTTATGGGCTTCATCGGGTTGATTTTGATCTATCTGATTCTGCACGAACTGAGGAAGACT
CGCGATCCAGACATGTCAGTGAACGCGTACTTTACAAAGTGGACAAACTGGCTGAATCTA
TCGGTGATACTGTTTACAATAGCACTCTGCGTATTTTACATTTACAAGCAAGTATACATG
GACGAGGTCACAAAAGAGTACATCTCCGACAAGTCAGCTTTCACCAATTTCTTCAAAATC
GCATTCTTCACTGACATTGTCACAATATTTGCGTGCCTTCTTCTATTTCTACTCATGCTC
AGGGCTACAAGGTTATTCCGTTTCTTCAAATGCTGGTCTGCTTTCGGAGAAACGATTAGT
GCGAGCGCGGGGTATCTCGCGGGAGCAACTTTGATGTTGATGGGTTGGATTTTGGGATTT
GCGGCTCTGGGATTTCTGGTGTACGGTCAAAGCTATACTCAGATCGTTCCGGATTTCCGC
GATTTTCCAAACTCAATATACACGATGTTCCGAGTATTTCGTGGCCGGTTCGACGTCCGA
ACCTGTTTCGAATATTCACCATTTTTCACAATATTTTTCTTCTTCACGTACTATATCGGA
GTTTTTTATATCTTCTGTCGGCTTTTTGCCGCAATTTTAATAAACGAGTACAAATTCTCA
CGTGGACGCAAGAGTCATCTGCGGATGGAAATTCTCGATTACGAAATACTCGACCATCTA
ATAGCGAGAATAAAACTCAGACTTGGCATCATAAAACCCAAGGAGGATCGACCGACTGTG
AGATTCGAAGGGATGTCGACTCCGTCTTCGAGAGGATCGTTCATGTCGCTGGACTCGTTT
GATACGTACAGCTTCTTTCCGGGGAGGATATCGCAGTGTTCATATGCCACTGGCATATCC
GCGTCATCATCAGATTCGGGATTCGGAACGCCATCCGATCACTCCATCTCCGTGTACGAT
TACCTCACCCTCGATCAACCTTCCGATACACCGATGGACACCCAGCATCTGGATTATTTA
TACGATCGCTTGTCCAACTATTCTGTCGACATGATGCTACACCGCTTCGAACGAGTCAGC
GTGCTCACAAGCGAGGTATCCGAGATGGAGTCAAATGCAGTAAAGGTGTCAATAATCAAG
AAACAGCAGGCGCTGTTGCAAAGTCAGGCGAAGGAGATCGCGACTGCCGCGTCGTCGGTT
ACGGTACAGCCCAATTTTGTTCCTGAACCTGAAGATCGAAGACCTCAAGGCAGTGCGAGT
AAGAGAAATGATATCTTATACTTGCCAGTTATTATCCGAGAGTATACTATTGCATAAT

InterProScan

Pfam
PKD1_2_channel (IPR013122) - T[3-318] 7.0E-49
PRINTS
PKD_2 (IPR003915) - T[47-69] 4.4E-6 - T[135-155] 4.4E-6 - T[228-249] 4.4E-6 - T[288-309] 4.4E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PKD1_HUMAN 24.427 % 91.3 4.59E-19
PKD2_HUMAN 26.393 % 95.5 1.38E-20
PK2L1_HUMAN 28.07 % 99.8 5.91E-22