- Clone 'ma330g12' >
- Clone 'ma333a17' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g13762.01.t
Possible name(s)
IGHMBP2; SETX; UPF1
Gene model
Location
chrUn [88,795,128 / 88,796,590]
Amino acid sequence
Length: 487
>Boschl.CG.Botznik2013.chrUn.g13762.01.p
MEEFVAAQKDLLKEEHQAEIDECLTLHKSLPLSELQNRGICLRKVHIFSVKTGLYGRIVA
KLGLRGSSDRSLPSNRFSSGDIVDVHLKTTSDFTKPEIQGVVLTVKDASISIAVDGEGSQ
AKINELYSGDTSLTLIKTANEVTYKRLQKGLDRLLHHTGPATNLVEIIFGNAQPTSYSGS
IETIEYYNGDLNQSQKDAVLFSLSQRDIAVIHGPPGTGKTTTVSEVIAQFVRNKQKVLAC
APSNVAIDNILEKLSGIVVDRRDGKKSVIKTIRIGHPARILTPELQKLSLDAIIAKSDSA
AIVQDVRKDIDGLHSRFRKRHNKTERAKMRDEKKFLTKELREREKKAIKEILSSAEVVLA
TNVGAHCDGPLKHLPTDHFDVVVIDECGQALEASCWIPILNAPKVILAGDHLQLPPTVKS
RAAAEKGLSVTLLERIVNLHKDVVKMLDTQYRMNADIMNWSSLELYDSKLKAHRSVSGHT
LHQLELR
Nucleotide sequence
Length: 1,462
>Boschl.CG.Botznik2013.chrUn.g13762.01.t
TGGAGGAATTTGTCGCCGCGCAGAAGGATCTACTGAAAGAAGAGCATCAGGCTGAAATCG
ACGAATGCTTAACCCTCCACAAATCACTGCCGTTATCAGAATTGCAAAACCGTGGGATTT
GTCTGAGAAAAGTACACATATTCTCGGTGAAAACAGGCCTTTATGGCAGGATTGTCGCTA
AGCTTGGATTAAGAGGCTCGTCCGATAGGTCTTTGCCCTCCAACCGTTTCTCTTCAGGAG
ATATTGTTGATGTGCACTTGAAGACAACCTCCGACTTTACCAAGCCTGAAATACAGGGAG
TTGTTCTCACTGTGAAAGATGCATCAATCAGTATAGCTGTTGATGGCGAAGGTTCGCAAG
CGAAGATCAACGAACTGTACTCCGGCGACACTAGCCTGACTCTTATTAAGACTGCGAATG
AAGTCACGTATAAGCGACTTCAGAAAGGTCTAGACAGGCTGCTGCATCACACCGGACCGG
CCACTAATTTAGTGGAGATTATTTTCGGAAATGCGCAGCCCACGAGCTACTCTGGGTCAA
TAGAAACTATCGAATACTACAACGGAGACTTGAACCAATCTCAAAAGGATGCTGTCTTAT
TCTCTTTGTCTCAACGCGACATTGCTGTGATCCACGGCCCGCCTGGTACCGGTAAAACAA
CCACGGTATCCGAAGTCATCGCGCAGTTTGTACGTAACAAGCAAAAAGTACTAGCATGCG
CGCCTTCCAACGTAGCCATCGATAATATCTTGGAGAAGTTGTCCGGGATCGTAGTGGACC
GACGCGATGGTAAAAAATCTGTGATTAAAACAATAAGAATCGGTCATCCTGCCCGAATTT
TAACACCGGAGTTACAGAAGCTCTCCCTAGACGCGATAATCGCCAAAAGCGATTCCGCTG
CAATAGTCCAAGACGTCCGTAAGGACATAGACGGGTTGCATTCGCGCTTTAGGAAAAGAC
ACAACAAAACAGAACGCGCCAAGATGCGAGACGAAAAGAAATTTTTGACCAAAGAGCTGA
GGGAACGCGAGAAAAAAGCAATTAAAGAGATATTATCATCCGCGGAAGTCGTGCTAGCTA
CCAATGTCGGCGCGCACTGTGACGGTCCCTTGAAACACTTACCAACCGACCATTTTGACG
TAGTCGTGATTGATGAATGCGGACAGGCGTTAGAAGCCTCGTGCTGGATACCGATTCTCA
ACGCGCCCAAAGTTATACTAGCAGGGGATCACCTACAACTCCCGCCTACCGTGAAATCAC
GAGCTGCTGCTGAAAAAGGATTGTCAGTCACGCTGTTGGAACGTATTGTAAACTTGCATA
AGGATGTCGTGAAAATGTTGGATACACAGTACAGGATGAATGCGGATATTATGAATTGGT
CGTCCTTGGAGTTGTATGATTCGAAATTGAAGGCGCACCGTTCTGTATCTGGACACACTC
TCCATCAACTTGAGCTGAGACT
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RENT1_HUMAN | 33.916 % | 124 | 3.54E-30 |
| SMBP2_HUMAN | 47.844 % | 426 | 1.23E-139 |
| SETX_HUMAN | 27.04 % | 105 | 1.19E-23 |