- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g13434.01.t
Possible name(s)
CSMD3; LPA; SVEP1
Gene model
Location
chrUn [86,653,216 / 86,657,434]
Amino acid sequence
Length: 272
>Boschl.CG.Botznik2013.chrUn.g13434.01.p
DPNVPDHSFCRNPDADLKGPWCWTGHVVKEYCDYIPKCQVRCSKPPVPIGGSIGHLEYVH
GGPNYANGSKVSYACDVNRKRNRELASEEDFDMICADGEWVGTMIACDFKYCMTPEHGIN
NSFAQAGKKILYGDSYAYRCYEGYMFSTGRASLTLTCSEDETWSTAELPAENYLLDRNNI
SSEEISRIACHSPCPDGFDAVSDWCVSIQRSDSGVPVHDTELTCEEGYQAPIEAGMNPHL
GPHARKSLKGKILLTGSKVASERRALGPDPFV
Nucleotide sequence
Length: 820
>Boschl.CG.Botznik2013.chrUn.g13434.01.t
GATCCTAATGTACCAGATCATTCGTTCTGCCGGAATCCAGACGCCGATCTGAAAGGCCCG
TGGTGCTGGACTGGTCACGTTGTCAAAGAGTATTGCGATTACATACCAAAGTGTCAAGTG
CGCTGTTCCAAGCCGCCAGTGCCCATTGGGGGAAGCATCGGACATTTGGAGTACGTCCAT
GGAGGTCCGAATTACGCCAATGGCTCGAAAGTGTCGTACGCTTGTGACGTGAATCGGAAA
AGAAATCGCGAGTTAGCGTCGGAGGAAGACTTTGATATGATCTGCGCTGATGGCGAATGG
GTTGGTACTATGATCGCGTGCGACTTCAAATACTGCATGACTCCGGAACACGGCATCAAC
AACAGCTTTGCACAAGCTGGAAAGAAGATACTATACGGTGATTCATATGCATACAGGTGC
TACGAGGGCTACATGTTTTCGACTGGCCGGGCGTCCTTGACTTTGACCTGCAGTGAAGAT
GAGACATGGTCCACCGCTGAGCTGCCAGCCGAAAATTATTTGCTGGATCGTAATAACATA
AGTAGCGAAGAGATATCGCGTATCGCTTGCCACAGTCCGTGCCCAGACGGGTTTGACGCG
GTTTCGGACTGGTGTGTTTCTGTACAACGTTCAGACTCCGGGGTTCCGGTGCACGACACC
GAGTTGACATGCGAGGAAGGCTACCAGGCGCCAATAGAAGCCGGCATGAACCCCCATCTC
GGACCCCACGCTAGGAAAAGTTTGAAAGGGAAAATCTTACTGACAGGGTCCAAGGTCGCG
TCTGAGCGCCGTGCTCTCGGACCAGATCCATTCGTGTAAG
| ProSiteProfiles |
Kringle (IPR000001) - T[1-38] 10.744 |
| Gene3D |
Kringle_sf (IPR038178) - T[2-39] 1.5E-7 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[6-41] 1.57E-9 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[9-22] . |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[40-109] 7.101 - T[110-173] 7.971 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[42-115] 3.2E-5 - T[111-165] 1.67E-7 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[42-107] 1.1 - T[112-169] 0.73 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[117-166] 6.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|