- Transcript 'KH2012:KH.C12.153.v1...' >
- Transcript 'KH2012:KH.C14.120.v2...' >
- Transcript 'KH2012:KH.C1.144.v2....' >
- Transcript 'Moocul.CG.ELv1_2.S19...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g13139.01.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
chrUn [84,565,784 / 84,574,334]
Amino acid sequence
Length: 519
>Boschl.CG.Botznik2013.chrUn.g13139.01.p
MCDKQDRAWLEDSLEKNDEDVFKIIRKEKERQRSGLELIASENFASAAVLQALGSCLNNK
YSEGYPGVRYYGGTEHIDELERLCQKRACEVFKLDADKWSVNVQPYSGSPANFAVFTAIV
QPHGRIMGLDLPDGGHLTHGFMTDKKKVSATSIFFESMPYKVHQDTGYIDYDRLAENAKL
FKPKVIIAGVSCYSRHLDYKRMKEIADENNAYLMADMAHISGLVAAGIVPSPFEHCDIVT
TTTHKTLRGPRSGMIFCRKGVRKVTAAGKEEMYNLEKPINEAVFPGLQGGPHNHAIGGVA
VALKQAMTEEFIADQKQTIANARHMAKLLEDRGFNVVTGGTDNHLMLVNLKNKGTDGNRA
DKTLEAIGIACNKNSCPGDTSALRPSGLRLGTPALTSRGFKEQDFDKVVDLIDRKLFQLY
CRNYTSFVQKVFVTLVNCLDRIVSVCDSGTVSIVTKCFVLHSAVQLTLDIQNSLEPKAPF
KDFKDKLYKDPKFVEEVKALKGEVSAFASRFPIPGLPTL
Nucleotide sequence
Length: 1,560
>Boschl.CG.Botznik2013.chrUn.g13139.01.t
CATGTGCGACAAACAAGATCGAGCTTGGCTTGAAGATTCGCTGGAGAAAAATGACGAAGA
CGTCTTCAAGATTATACGAAAGGAGAAGGAACGGCAGCGGTCTGGCTTGGAGTTGATCGC
GTCTGAGAACTTTGCCAGTGCCGCAGTATTACAGGCCTTGGGCTCCTGCCTCAACAACAA
ATACTCCGAAGGATATCCCGGTGTCCGATACTATGGTGGTACAGAACACATCGACGAACT
GGAGCGTCTATGTCAGAAAAGAGCTTGTGAAGTTTTCAAACTAGATGCTGATAAATGGAG
CGTTAATGTACAACCTTACTCGGGGTCGCCTGCGAACTTTGCAGTGTTTACAGCGATTGT
ACAACCTCACGGCAGAATAATGGGACTGGATCTGCCCGACGGCGGTCACCTGACTCACGG
ATTTATGACGGACAAAAAGAAAGTGTCGGCGACTTCCATATTTTTTGAATCGATGCCATA
CAAGGTTCACCAAGACACTGGCTACATCGATTACGACAGATTAGCGGAAAACGCGAAGCT
CTTCAAGCCGAAGGTTATTATCGCAGGAGTGAGCTGCTACTCTAGGCATTTGGACTACAG
GAGAATGAAGGAGATTGCTGATGAGAACAACGCATACCTCATGGCTGACATGGCTCATAT
CAGTGGCCTGGTCGCTGCTGGCATCGTGCCGTCTCCGTTTGAGCACTGCGACATCGTTAC
GACCACGACTCACAAGACTCTCCGCGGCCCACGCTCTGGGATGATTTTCTGTCGAAAAGG
CGTACGCAAAGTGACAGCCGCCGGTAAAGAGGAGATGTACAACCTGGAGAAGCCGATCAA
CGAAGCTGTGTTCCCTGGTTTGCAAGGAGGACCGCACAACCACGCGATTGGCGGGGTGGC
TGTCGCGCTCAAGCAGGCCATGACCGAGGAATTCATTGCCGACCAGAAACAGACTATTGC
TAACGCAAGACACATGGCCAAATTGCTTGAGGACCGAGGGTTCAACGTGGTAACTGGCGG
TACCGATAACCACCTCATGCTCGTCAATTTGAAGAACAAGGGTACCGACGGAAACAGAGC
CGACAAGACTTTGGAAGCGATCGGTATCGCGTGCAATAAAAACTCTTGCCCCGGGGACAC
GTCTGCATTGAGGCCCAGCGGATTGCGGCTCGGCACGCCGGCGCTGACCTCCAGAGGTTT
CAAGGAGCAGGACTTCGATAAAGTTGTTGATTTGATAGATCGAAAGCTCTTCCAACTGTA
CTGTCGAAATTATACCAGTTTTGTTCAAAAAGTATTTGTAACACTTGTAAATTGTCTTGA
CCGAATTGTAAGCGTCTGCGATTCTGGCACGGTCAGCATCGTCACAAAATGTTTTGTCTT
GCATAGCGCCGTGCAATTGACGTTGGACATACAGAATTCGTTGGAGCCCAAAGCCCCTTT
CAAGGACTTCAAGGACAAGCTCTACAAAGATCCCAAATTTGTGGAGGAAGTCAAAGCTCT
GAAAGGAGAAGTGTCGGCGTTCGCTTCAAGATTTCCTATACCGGGATTGCCTACATTGTG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[2-434] 2.8E-171 - T[459-517] 190.0 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[9-417] 2.7E-174 |
| Hamap |
Ser_HO-MeTrfase (IPR001085) - T[13-515] 43.102 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[15-416] 0.0 |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[18-42] 1.4E-201 - T[317-415] 1.4E-201 - T[454-519] 3.3E-8 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[43-316] 1.4E-201 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[237-253] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 64.44 % | 641 | 0 |
| GLYM_HUMAN | 54.776 % | 565 | 0 |