- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g12939.01.t
Possible name(s)
PTPN23; RHPN1; RHPN2
Gene model
Location
chrUn [83,139,321 / 83,152,641]
Amino acid sequence
Length: 530
>Boschl.CG.Botznik2013.chrUn.g12939.01.p
MNSQITPYQNESTKTQSMAMVSLGLKETKDLDFTQPLKDFILEHYSEEPHNFEDEIADLI
DLRTSIRTPARNEDGIKLLLEYYGQLYFVDYRFFPPDRQLNIHFHWYDSVTGIPSMQKSI
SLEKASVLFNLGALHSQIGTRADRGKRTGINEAIAAYENAAGTFSYLCQNFSHSPCADLS
HGFLTVMTKLMLAQAQECVFEKHTLSGFEMELGKCITVAQEASMVSERYQLVHTAMTVPP
VCDTVPASWISIADVKCHHFKALAHYYTAVGLLHQADIAEVDEISKLLESFYLKTEALQD
IPTPQDVVKRREDRRRLGRAHLSQAIFHHEKAKSLLKMSKALQKVSTLQTFLNEAHMRSL
DQKISLSESQDTDLFDILEVPDIVAAANIEAEAKAPVLTSVKVKDIFHSLGPLSMFSARQ
KFTAPRPIDITHGVEAWGFTLSGDAPVKVTNVSQRLRNCGLHNGDVITAVDGVNVKWKTC
DELTDMLDKQLYLHRKKENQILERVISNYNHSAPAITIKVITLISSEIPK
Nucleotide sequence
Length: 1,590
>Boschl.CG.Botznik2013.chrUn.g12939.01.t
TGAACAGTCAGATTACGCCATACCAGAATGAAAGGACAAAGACTCAAAGCATGGCTATGG
TCTCACTCGGTTTAAAAGAAACAAAAGACTTGGATTTTACACAACCTCTAAAAGATTTTA
TACTGGAACATTACAGTGAAGAGCCTCACAATTTCGAAGATGAAATTGCCGACCTGATTG
ATTTACGGACTTCGATCAGAACTCCCGCTAGAAATGAAGACGGTATCAAGTTGCTTTTGG
AATATTATGGACAGCTGTATTTTGTGGACTACAGATTTTTTCCTCCAGACCGTCAACTCA
ACATTCACTTTCATTGGTATGATTCCGTTACCGGGATCCCGTCGATGCAGAAGTCTATCT
CTTTGGAAAAAGCAAGCGTGTTGTTCAATTTAGGCGCGTTGCATTCTCAAATCGGGACCA
GGGCAGACAGAGGGAAAAGGACGGGAATCAACGAAGCAATCGCAGCTTACGAAAACGCCG
CCGGCACTTTCAGTTACTTATGTCAGAACTTCAGCCATTCCCCATGCGCCGACTTGAGCC
ACGGATTTCTCACTGTAATGACGAAGCTCATGCTAGCCCAAGCGCAAGAATGTGTATTCG
AAAAACACACCCTGTCCGGTTTTGAGATGGAACTGGGAAAATGTATCACTGTAGCGCAGG
AGGCGTCAATGGTGTCTGAAAGGTATCAACTGGTTCACACTGCGATGACCGTGCCTCCTG
TCTGTGACACGGTGCCAGCGTCATGGATTAGCATAGCTGATGTGAAGTGTCATCATTTTA
AAGCTCTCGCTCATTATTACACTGCGGTCGGTCTACTGCATCAAGCTGGTATTGCTGAGG
TCGATGAAATTTCGAAGCTGTTGGAATCGTTCTATTTGAAGACGGAGGCGTTGCAGGACA
TACCGACACCGCAAGATGTTGTCAAAAGACGAGAAGACAGACGGAGACTCGGTCGAGCGC
ATCTTTCTCAAGCGATATTTCATCACGAAAAAGCAAAGAGCTTGTTAAAAATGAGCAAAG
CGCTACAGAAAGTCTCGACGTTGCAGGCCTTTTTGAACGAGGCACATATGAGATCGCTGG
ACCAAAAGATTTCCCTCTCTGAATCGCAAGATACGGATTTATTCGATATCTTGGAGGTTC
CCGATATAGTCGGTGCTGCGAACATAGAGGCGGAAGCAAAAGCCCCCGTGTTGACATCGG
TGAAAGTCAAAGACATATTTCACAGTTTGGGACCTTTGTCTATGTTTTCGGCTCGACAGA
AGTTTACTGCCCCGCGTCCCATCGACATCACCCATGGCGTCGAGGCGTGGGGGTTCACTC
TCTCCGGTGACGCACCCGTCAAAGTCACAAATGTGTCGCAACGATTAAGGGACTGCGGGC
TGCACAACGGCGACGTGATTACCGCCGTCGACGGGGTTAACGTGAAATGGAAGACTTGCG
ACGAACTCACAGACATGCTCGACAAGCAATTGTACTTGCATCGGAAGAAAGAGAATCAAA
TACTAGAGAGAGTGATCTCAAATTACAATCATTCGGCGCCGGCAATCACAATTAAAGTCA
TTACGTTGATATCGTCTGAAATCCCGAAGG
| Gene3D |
BRO1_sf (IPR038499) - T[11-410] 3.1E-82 |
| SMART |
BRO1_dom (IPR004328) - T[19-424] 6.2E-109 |
| ProSiteProfiles |
BRO1_dom (IPR004328) - T[19-413] 44.378 |
| Pfam |
BRO1_dom (IPR004328) - T[20-423] 2.2E-85 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[414-489] 1.97E-9 |
| SMART |
PDZ (IPR001478) - T[435-499] 0.0019 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHPN2_HUMAN | 43.699 % | 408 | 1.37E-135 |
| RHPN1_HUMAN | 39.754 % | 345 | 5.86E-111 |
| RHN2P_HUMAN | 39.431 % | 327 | 1.74E-105 |
