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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.620.v3....' > 
  2. Region 'REG00000148' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g12880.01.t

Possible name(s)

HES1; HES2; HES4

Gene model

Boschl.CG.Botznik2013.chrUn.g12880

Location

chrUn [82,725,065 / 82,726,227]

Sequences

Amino acid sequence

Length: 322

>Boschl.CG.Botznik2013.chrUn.g12880.01.p
MKSERRASKPLMEKRRRERINKSLNELKSILLEALRKDSTCHSKLEKADILEMTVRYLKS
IQRQRISTIDPAVMLNKYRAECFGCKPDMGQHGNLHHDVKTRLMSHIGTHPYANMMPGNQ
AHLMTAPNGNVATIPVHLTANGQVRSMGIPPFPEQTKGFPNVSYLPAMQRYQTEELHNKI
NRLQHASPCHSPESVSSYGKRSASTDSGPGSPDPKKRCYASSRKISSDAEQGFTRNFAAS
PDSNKMSPSSHEVPCSPDSRGTPESVFSCCEDSPKSCSPCPSSNGQEVYTMRYPFVNTSV
KCEMRSPSSPCSENGESVWRPW

Nucleotide sequence

Length: 969

>Boschl.CG.Botznik2013.chrUn.g12880.01.t
TATGAAGTCTGAACGCAGGGCTTCGAAACCGTTGATGGAAAAACGTAGACGCGAAAGAAT
AAACAAAAGTTTGAACGAGCTGAAAAGCATACTGCTGGAAGCACTCCGTAAAGAGAGCAC
TTGTCACTCGAAACTTGAAAAAGCCGACATTCTGGAAATGACTGTGCGTTACTTGAAGAG
CATACAACGACAACGAATCTCGACCATCGACCCGGCTGTTATGCTAAACAAGTACCGCGC
CGAGTGTTTCGGTTGCAAGCCCGACATGGGCCAGCACGGAAACCTGCACCACGATGTCAA
AACAAGATTAATGAGTCACATCGGCACGCATCCGTACGCGAACATGATGCCTGGAAATCA
AGCCCATCTCATGACAGCGCCTAACGGTAACGTGGCAACGATACCTGTACATCTCACCGC
CAACGGACAAGTTCGATCTATGGGAATACCGCCTTTTCCCGAGCAAACGAAAGGATTCCC
AAACGTCAGCTACCTCCCAGCGATGCAACGCTACCAAACGGAAGAGCTTCACAATAAAAT
CAACAGACTCCAACACGCGTCCCCTTGCCACAGCCCAGAGAGCGTATCATCGTACGGGAA
GCGTTCTGCCAGTACCGATTCGGGCCCTGGTTCTCCAGACCCTAAAAAGAGATGCTACGC
GTCGTCACGAAAAATAAGCTCCGACGCAGAGCAGGGATTTACGCGTAATTTTGCAGCGAG
CCCGGACTCGAACAAAATGTCGCCGTCATCGCACGAAGTCCCGTGTTCCCCCGATTCGCG
CGGAACGCCTGAATCAGTGTTCAGCTGTTGCGAGGATTCTCCAAAATCGTGTTCGCCTTG
CCCGTCATCCAATGGACAAGAAGTATACACGATGCGGTACCCGTTCGTGAATACTTCCGT
AAAATGCGAGATGCGTTCGCCATCGTCACCGTGTAGCGAAAATGGCGAATCGGTTTGGCG
ACCTTGGTA

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[1-65] 6.6E-25
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[2-67] 4.84E-13
CDD
bHLH_dom (IPR011598) - T[2-65] 1.91228E-16
ProSiteProfiles
bHLH_dom (IPR011598) - T[4-61] 15.834
Pfam
bHLH_dom (IPR011598) - T[5-62] 3.7E-14
SMART
bHLH_dom (IPR011598) - T[10-67] 3.5E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HES4_HUMAN 50 % 105 4.32E-27
HES1_HUMAN 46.923 % 107 4.6E-27