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  1. Transcript 'KH2012:KH.S1740.2.v2...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S10...' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g12519.01.t

Possible name(s)

BRIP1; RTEL1; RTEL1-TNFRSF6B

Gene model

Boschl.CG.Botznik2013.chrUn.g12519

Location

chrUn [80,267,700 / 80,269,526]

Sequences

Amino acid sequence

Length: 218

>Boschl.CG.Botznik2013.chrUn.g12519.01.p
MDPHKLLLHGIEVEFPFDPYPEQLHYMKCVIESLQTGNNAILESPTGTGKTLCLLCATLA
WRRAEIKQRAEKLGQNIAGAGVEPDYPLGWNGGDARPDQEAQAAQQVPSAPRIIYASRTH
SQLAQVVKELKRTAYAKDTKLSILGSRNQMCIHPEVSKQTNNVAMIHSCRNKVNKHLCHF
YNNVENVRKSGSFTNEILDIEELVELGKKRSACPYYAA

Nucleotide sequence

Length: 656

>Boschl.CG.Botznik2013.chrUn.g12519.01.t
CATGGATCCACATAAGTTGCTTTTACACGGGATCGAAGTCGAGTTTCCGTTCGACCCCTA
TCCGGAACAACTACACTACATGAAATGCGTGATTGAATCCCTGCAAACTGGCAACAACGC
CATTTTGGAATCTCCAACCGGTACTGGCAAAACTCTGTGTCTCCTCTGCGCAACATTAGC
TTGGAGAAGAGCAGAGATCAAGCAAAGGGCTGAAAAACTGGGTCAAAATATTGCCGGTGC
AGGGGTGGAACCAGATTATCCTTTAGGCTGGAATGGAGGCGATGCCCGACCGGACCAGGA
GGCACAGGCTGCACAGCAAGTCCCGTCAGCCCCCAGGATCATATACGCATCCCGTACCCA
TTCTCAATTGGCTCAAGTGGTCAAAGAATTGAAAAGAACAGCGTACGCCAAAGATACAAA
ACTGAGCATCCTCGGATCACGTAATCAAATGTGCATCCATCCCGAGGTCTCGAAGCAGAC
TAATAACGTTGCTATGATTCATTCGTGTCGTAACAAAGTGAACAAGCATCTGTGCCACTT
TTATAATAATGTGGAAAACGTACGTAAATCAGGATCGTTTACGAATGAAATTCTGGATAT
CGAGGAGTTGGTTGAGCTCGGGAAAAAGCGAAGTGCTTGTCCGTATTATGCTGCAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[2-130] 4.25E-11
ProSiteProfiles
Helic_SF1/SF2_ATP-bd_DinG/Rad3 (IPR014013) - T[9-218] 20.391
SMART
Helicase-like_DEXD_c2 (IPR006554) - T[11-218] 3.2E-11
Pfam
DEAD_2 (IPR010614) - T[115-217] 9.4E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FANCJ_HUMAN 39.823 % 87.8 4.57E-20
RTEL1_HUMAN 50.698 % 191 3.59E-56