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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g11790.01.t
Possible name(s)
IGSF22; MYBPC1; TTN
Gene model
Location
chrUn [75,488,541 / 75,498,629]
Amino acid sequence
Length: 1,255
>Boschl.CG.Botznik2013.chrUn.g11790.01.p
SGIDEEWVRMNPDTVKSCEYVVPNLSSGSEYNFRVRAVNTAGPGEATEVSGNVTVTDRLE
APDFQIDADFKSHYVVRAGCSLRLFVLYFGRPRPSVMWHKSDVELQDRAEITTTDYSTLL
VINATTREDSGKYVLRLGSSAGEKTLNLTVKVLDSPGPVGPITCKEVTCDSVTLSWEPPV
IDGGAHVKNYIVEKREVSRKSWQTVATKCSRTSFKITSLQEGQTYLFRVIPENEYGIGVP
RETESPITATEVPGIPAKLDIDSVTKNSITVSWGRPEYDGGSRISAYILEMCEKGAPKFT
ECACTKGSVFAHTVGNLREGLEYEVRVRAKNDAGVGEARDAFCSVLTKDEQVLPEADLRG
VYHNTVIVKSGSNINVDIPIVGKPTPEVTWTVQGIKLKETERTSMTTTAENTALVIRNAE
KNDAGEYSLKLVNNSGEQTHKINVVVLDKPGPPSGPIEFSDVTADSITISWQPPEETGGS
EITNYTVDYREFGRSTWTPVSACTTRTTLKIGRLVRDTDYQFRVTAESRFGLGEPLVSDV
CKADYQSTIPKCPGTPTVTKMTRDSATLTWDEPVHDGGSPITGYYVEKKEKNSILWQKDT
EKSISSQTYVVKGLLEGLEYQFRVQAENEVGLSKYSDASKPVQAISSVGPPLDIKITDMS
RNSIALAWKQPISDGGSRIASYNVERRHVPDGRWLKCNFTKVVDCFYEVTGLTPNDIYEF
RITAKNSVGTVSQPSDVFGPITCKPTYKPPSIELDSKLISDVVEVKAGTTLKLDAVIQGK
PEPNVYWYKGERDLESSDHAQITTLPGLTSLHIRDCNRSDSAKYTITLRNDCGEKSVTVN
VKVLDTPGIPKGPIQFSRVSAEKCNIAWDWPDEDGGAQITHYVIEKRETSRLSWVSVHDS
NEHTSCTIPKLVANNEYIFRVAAVNKHGRGPSLESAPLIAKNQFDVPSAPGRPEMVATTK
DSLTISWDRPTTDGGNEITNFVVEKREKQGFRWSRCNKDTEITDLRYKATKLRPHSEWEF
RVCAENAAGAGPFSEPSPMIKVQDPLFPPAAPGSFRITDTTRSSISLAWNMPLYDGGSPI
VGYLLEMAECLPDQDEDWKKVHQSSLIKTKEFTVTGLKEGCEYTFRVFSANSAARSDTPA
KIAETVTARDIEEEPSLTIDGRIGRRVSVRAGKPLRLLVFVSGRPSPSVNWSKSPLGENL
ASRAIVDTHEAASKLLIEKTNRYDAGKYTITVENASGVKEAHINVKVFGKKARSI
Nucleotide sequence
Length: 3,770
>Boschl.CG.Botznik2013.chrUn.g11790.01.t
ATCGGGCATTGACGAGGAGTGGGTACGCATGAATCCGGACACTGTCAAGTCCTGCGAATA
CGTCGTTCCAAATTTGTCTTCGGGATCGGAATATAACTTCCGCGTCAGAGCCGTTAACAC
CGCAGGACCCGGCGAAGCCACCGAAGTCTCTGGCAATGTGACAGTCACAGACCGACTTGA
AGCTCCCGATTTCCAAATCGACGCCGATTTCAAATCCCATTACGTAGTGAGGGCCGGTTG
CTCGCTGAGACTATTCGTCCTGTATTTCGGAAGGCCCAGACCTTCCGTGATGTGGCACAA
GTCAGACGTGGAGCTGCAGGACCGTGCCGAAATTACCACGACCGATTACTCAACGCTGCT
GGTAATTAATGCCACTACGAGAGAGGATTCGGGAAAATACGTTCTCAGACTTGGGAGCAG
TGCAGGAGAGAAGACTCTGAATCTAACAGTTAAAGTGTTGGGTTCTCCTGGACCTGTTGG
CCCGATTACTTGCAAGGAAGTTACCTGCGACTCTGTTACGTTATCATGGGAGCCGCCTGT
TATCGACGGAGGCGCCCACGTCAAGAATTACATCGTTGAAAAGAGAGAGGTGTCCAGAAA
AAGCTGGCAGACAGTGGCCACAAAATGCTCGAGAACATCGTTCAAAATCACAAGCCTTCA
AGAAGGACAGACCTACCTATTTAGAGTCATCCCGGAAAATGAATACGGTATTGGCGTACC
TAGAGAAACAGAATCTCCTATCACAGCAACAGAAGTGCCCGGTATACCTGCCAAACTGGA
TATCGACAGTGTAACTAAGAATTCTATCACTGTATCATGGGGACGGCCTGAATACGACGG
CGGAAGCCGAATCAGCGCTTACATATTGGAGATGTGTGAGAAGGGCGCTCCTAAATTCAC
AGAGTGCGCATGCACGAAAGGATCGGTGTTCGCTCACACTGTGGGTAATTTGAGAGAAGG
CCTCGAATATGAGGTGAGAGTGAGAGCAAAGAACGACGCTGGAGTGGGTGAAGCGCGTGA
CGCGTTCTGTTCTGTACTGACAAAAGATGAACAAGGACTGCCTGAAGCCGATCTGCGTGG
TGTTTACCACAATACCGTCATAGTGAAATCCGGCTCGAACATCAATGTGGACATACCAAT
AGTTGGTAAACCAACACCCGAAGTTACATGGACGGTGCAGGGAATCAAATTGAAAGGAAC
TGAAAGAACATCCATGACTACAACTGCGGAAAATACCGCACTAGTGATCAGGAATGCAGA
GAAAAATGATGCCGGTGAATACAGTCTCAAATTGGTCAACAACTCTGGTGAACAGACGCA
TAAAATCAACGTCGTAGTGCTCGGTAAGCCTGGACCACCATCTGGTCCTATAGAGTTTTC
AGACGTGACAGCAGACTCTATCACTATCTCCTGGCAGCCTCCTGAAGAAACTGGTGGCAG
CGAAATTACCAATTACACCGTAGATTACAGAGAATTCGGGAGATCCACATGGACCCCAGT
CTCAGCGTGCACTACAAGGACAACATTAAAGGTTGGACGACTTGTTAGAGACACCGATTA
CCAATTCCGAGTGACTGCGGAGAGTAGATTTGGACTCGGTGAACCATTGGTATCGGATGT
ATGCAAAGCTGACTATCAGAGCAGTATACCTAAATGTCCTGGTACTCCTACTGTAACCAA
AATGACACGAGATTCAGCCACGTTAACGTGGGATGAGCCAGTGCATGATGGAGGAAGCCC
AATCACCGGGTATTACGTTGAAAAGAAGGAAAAGAATTCAATTCTGTGGCAGAAAGACAC
GGAAAAATCAATATCATCACAGACTTACGTCGTGAAAGGATTGCTGGAAGGATTGGAGTA
TCAATTCCGAGTGCAAGCAGAAAACGAAGTAGGCTTGAGTAAGTACAGCGACGCCAGTAA
ACCCGTGCAAGCCATCAGCTCTGTGGGTCCGCCGTTGGATATCAAGATCACGGACATGTC
CAGGAATTCTATCGCTTTGGCATGGAAGCAGCCTATTTCCGACGGTGGCAGCAGGATAGC
ATCGTATAACGTCGAAAGAAGGCACGTGCCAGACGGAAGATGGCTGAAATGCAACTTCAC
AAAAGTCGTAGATTGCTTTTACGAAGTCACGGGATTAACGCCAAACGATATTTACGAGTT
CAGAATCACTGCAAAAAATTCAGTAGGGACAGTCAGTCAACCGTCCGACGTTTTCGGACC
AATCACTTGCAAGCCTACATACAGGCCTCCTAGCATTGAGCTAGACAGCAAGCTTATATC
GGACGTGGTAGAGGTAAAAGCAGGAACTACGCTCAAACTTGATGCTGTGATACAAGGAAA
ACCAGAGCCTAACGTTTATTGGTACAAAGGCGAGAGAGATCTGGAATCTTCAGACCATGC
TCAAATTACCACCCTACCGGGATTAACATCTTTGCATATCCGTGATTGTAACAGATCGGA
CAGCGCCAAATATACAATCACATTAAGAAATGATTGTGGAGAAAAAAGTGTCACAGTCAA
TGTAAAAGTGCTCGGTACTCCTGGTATTCCAAAAGGACCGATACAATTCAGCAGAGTATC
CGCGGAGAAATGTAACATCGCATGGGACTGGCCTGATGAAGACGGTGGCGCACAAATCAC
ACATTACGTCATCGAAAAGAGAGAAACATCAAGACTTAGCTGGGTTTCTGTCCATGACAG
TAACGAACACACCAGTTGCACGATTCCGAAACTAGTGGCAAACAACGAATATATATTCCG
TGTGGCTGCTGTTAATAAACACGGCCGTGGTCCTTCTCTGGAATCTGCGCCTTTGATTGC
GAAAAATCAATTCGGTGTGCCATCTGCTCCTGGTAGGCCTGAGATGGTCGCTACCACAAA
GGATTCTTTGACGATATCGTGGGATAGACCGACCACTGACGGCGGTAACGAAATTACTAA
TTTTGTTGTTGAAAAGCGGGAAAAACAAGGCTTCCGATGGTCAAGGTGTAATAAGGATAC
TGAAATAACTGACTTGCGCTACAAAGCCACAAAGCTTCGTCCTCATTCGGAATGGGAGTT
CCGGGTGTGTGCTGAAAACGCAGCTGGCGCCGGGCCCTTCAGTGAACCTAGCCCCATGAT
AAAAGTACAAGATCCGCTATTTCCCCCGGCCGCACCAGGAAGTTTTAGAATCACCGACAC
AACGCGCTCGTCGATCAGTCTGGCTTGGAACATGCCGCTGTACGACGGCGGTAGTCCTAT
TGTTGGATATTTGCTGGAAATGGCAGAGTGCTTACCGGACCAAGATGAAGATTGGAAAAA
GGTTCATCAGTCCAGTCTCATCAAGACGAAAGAGTTTACCGTGACTGGTTTGAAAGAGGG
GTGCGAATATACGTTCCGTGTATTCTCAGCCAACTCTGCCGCTCGTAGCGACACTCCTGC
CAAGGTTGCAGAGACTGTAACCGCTAGAGATATTGAAGAAGAGCCTTCTTTGACAATAGA
CGGAAGAATTGGGAGAAGAGTATCAGTTCGAGCCGGAAAACCGTTAAGGCTTTTGGTATT
TGTATCAGGGCGTCCAAGTCCATCTGTCAACTGGTCGAAATCTCCATTGGGTGAAAATTT
GGCTTCGCGGGCAATCGTAGACACACACGAAGCCGCGTCGAAACTTTTGATCGAAAAAAC
AAACCGTTACGACGCTGGGAAGTACACGATCACTGTCGAAAACGCGTCTGGCGTGAAGGA
AGCTCATATCAACGTCAAGGTCTTTGGTAAGAAGGCCCGATCAATTTAGA
| SMART |
FN3_dom (IPR003961) - T[1-44] 100.0 - T[156-238] 6.6E-14 - T[253-336] 7.9E-13 - T[450-533] 1.5E-15 - T[550-633] 9.1E-15 - T[648-731] 7.0E-10 - T[847-930] 6.0E-12 - T[947-1031] 2.1E-13 - T[1049-1136] 6.7E-13 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[1-59] 14.911 - T[158-253] 23.55 - T[255-350] 20.71 - T[452-546] 22.935 - T[552-647] 23.345 - T[650-746] 23.763 - T[850-943] 19.984 - T[949-1045] 22.146 - T[1051-1150] 19.858 |
| Gene3D |
Ig-like_fold (IPR013783) - T[2-60] 1.1E-10 - T[61-154] 1.6E-16 - T[155-252] 9.6E-26 - T[253-362] 1.2E-23 - T[363-447] 2.1E-18 - T[448-543] 1.5E-25 - T[544-646] 1.8E-28 - T[647-747] 5.4E-25 - T[748-845] 1.3E-20 - T[846-943] 2.1E-23 - T[946-1048] 3.6E-27 - T[1049-1152] 3.3E-22 - T[1153-1251] 2.6E-15 |
| CDD |
FN3_dom (IPR003961) - T[4-48] 1.93122E-8 - T[156-248] 1.44825E-20 - T[253-337] 2.06917E-16 - T[450-542] 4.3636E-19 - T[553-639] 3.24745E-20 - T[649-742] 5.3464E-17 - T[847-939] 5.40246E-15 - T[947-1040] 4.15636E-19 - T[1049-1147] 1.12623E-15 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[5-65] 1.06E-10 - T[154-342] 1.41E-42 - T[448-640] 3.36E-45 - T[649-752] 2.02E-22 - T[845-1043] 3.11E-41 - T[1038-1157] 1.57E-20 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[62-147] 6.615 - T[354-445] 7.976 - T[750-838] 7.613 - T[1155-1246] 8.538 |
| SMART |
Ig_sub (IPR003599) - T[71-153] 0.0018 - T[363-447] 8.9E-5 - T[760-844] 7.9E-6 - T[1164-1248] 9.3E-6 |
| Pfam |
Ig_I-set (IPR013098) - T[72-152] 7.7E-10 - T[365-446] 1.9E-16 - T[760-843] 7.4E-17 - T[1165-1247] 2.9E-13 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[73-159] 1.51E-14 - T[364-456] 4.37E-19 - T[762-853] 3.39E-22 - T[1166-1250] 1.49E-12 |
| SMART |
Ig_sub2 (IPR003598) - T[77-142] 0.55 - T[369-436] 0.025 - T[766-833] 0.19 - T[1170-1237] 0.068 |
| Pfam |
FN3_dom (IPR003961) - T[158-239] 4.2E-13 - T[256-337] 5.8E-11 - T[453-534] 7.1E-16 - T[553-636] 1.9E-16 - T[650-735] 4.8E-12 - T[853-931] 4.2E-15 - T[948-1034] 5.1E-14 - T[1051-1133] 7.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TITIN_HUMAN | 47.352 % | 1175 | 0 |
| IGFN1_HUMAN | 29.711 % | 228 | 9.85E-61 |
| MYPC1_HUMAN | 29.032 % | 224 | 9.52E-60 |