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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g10617.01.t

Possible name(s)

TRAF3; TRAF5; TRAF6

Location

chrUn [68,454,406 / 68,463,415]

Sequences

Amino acid sequence

Length: 290

>Boschl.CG.Botznik2013.chrUn.g10617.01.p
RQKRCPVDNEALNEELVFPDNYARREILDLKAKCRNKGCNHVCELRRMKDHGEVCPMRKI
PCKHKCGLDLLIEDAIFHEESQCPRRPVQCDKCGSLYPLCEEQNHKEECKQHRLITCPHC
THEMKQYKLQQHLTMECSQAPIKCVFEKVGCPQEHSRHNMQQHMEKSTQVHLQYLLSNIC
QVMKSNSSISELLQKLSSRVQDLESNNSCDGSADVMDIYERDTQGMANGYKNMPRPAKSL
HDADDEEDEIQKIKAYNLKMERASDPVRLENPSQSSASALAKDAEEKLIG

Nucleotide sequence

Length: 874

>Boschl.CG.Botznik2013.chrUn.g10617.01.t
CGACAGAAACGCTGCCCCGTCGATAACGAAGCCCTTAATGAAGAACTAGTGTTTCCCGAT
AATTATGCGAGGAGAGAAATACTTGACCTGAAGGCTAAGTGTCGGAATAAAGGATGCAAT
CATGTGTGCGAGCTTCGAAGGATGAAGGATCACGGCGAAGTGTGTCCCATGAGAAAAATT
CCGTGCAAGCACAAATGCGGACTGGACTTGCTAATCGAAGACGCCATTTTTCACGAAGAA
AGTCAATGTCCGAGACGGCCTGTCCAGTGCGATAAATGCGGGAGTCTTTACCCGCTTTGC
GAAGAACAGGATCATAAAGAAGAATGCAAACAGCATCGGCTTATTACCTGCCCACATTGC
ACACACGAAATGAAACAGTACAAGGTGCAACAGCATCTAACAATGGAATGTTCGCAAGCG
CCTATTAAATGTGTCTTTGAAAAAGTTGGATGTCCTCAAGAGGATTCCAGACACAATATG
CAGCAGCATATGGAGAAGTCGACACAGGTCCACCTGCAATACCTTCTGAGCAACATCTGT
CAAGTTATGAAGAGCAATTCAAGCATATCTGAGCTGCTGCAAAAGCTATCGTCACGAGTC
CAGGATCTTGAGAGCAATGACTCGTGCGATGGCAGTGCTGACGTTATGGATATTTACGAA
AGGGATACGCAAGGCATGGCGAATGGCTACAAAAATATGCCTAGGCCAGGTAAATCTTTA
CACGACGCTGATGACGAAGAGGACGAAATACAGAAGATAAAAGCCTACAACCTGAAAATG
GAGAGGGCGTCCGATCCCGTGAGGCTTGAAAATCCGTCCCAATCGTCCGCCTCGGCGCTA
GCGAAAGACGCAGAAGAGAAGTTGATCGGGTGAG

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[1-67] 3.4E-10 - T[110-172] 6.7E-6
SUPERFAMILY
TRAF-like (IPR008974) - T[30-105] 7.19E-5 - T[115-177] 1.5E-6
ProSiteProfiles
Znf_TRAF (IPR001293) - T[78-161] 10.95
Pfam
Znf_TRAF (IPR001293) - T[105-163] 1.4E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRAF5_HUMAN 30.198 % 84.3 3.02E-18
TRAF6_HUMAN 34.031 % 115 3.13E-29