- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g10337.01.t
Possible name(s)
CCT3; CCT4; CCT5
Gene model
Location
chrUn [66,611,246 / 66,615,359]
Amino acid sequence
Length: 485
>Boschl.CG.Botznik2013.chrUn.g10337.01.p
MLMDPQGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMSA
AEQFLEQKMHPTVIIAAYRQALEDIQQILKDISVTVDVNDPKEMKKIIASAIGTKFISKW
TDLATEMAIKAVATVAIEDKTSGQREIDIKRYAKVEKVPGGVIEESRVLQGVMLNKDITH
PRMKRRIENPRILLLDCPLEYTKGESQTDIELSKENDFNRILQLEEEYIRRVTSEIIAFK
PDLVFTEKGISDLAQHFLVKAGITAIRRVRKSDNNRIARACGATVCSRTDEIREEDLGTG
AGLFEIRKFGDEYFTFITECKNPKACTILLRGASKDILMEVERNLQDAMQVARNVMVDAR
LVPGGGAVEMAVAQRMAEKSKSMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRTITAL
RAKHTEPDNKTWGVDGETGQIADMTVLNIWEPLSVKVQTYKTAMETAMLLLRIDDIVSGV
KKTDN
Nucleotide sequence
Length: 1,458
>Boschl.CG.Botznik2013.chrUn.g10337.01.t
TGCTGATGGATCCTCAAGGCGGTATCGTAATGACTAATGACGGCAACGCCATTCTGCGAG
AAATCCAGGTTCAACATCCTGCGGCGAAATCAATGATTGAAATCAGCCGAACACAAGATG
AAGAAGTCGGAGATGGAACCACATCTGTCATAATCCTTGGGGGAGAGATGATGTCTGCCG
CCGAACAATTTTTGGAACAGAAAATGCACCCTACTGTGATCATAGCGGCTTACCGTCAAG
CTCTCGAAGACATACAACAGATCTTGAAAGACATCAGGGTTACCGTCGACGTGAACGACC
CGAAGGAAATGAAGAAAATCATTGCGAGCGCGATCGGAACAAAGTTCATCAGCAAATGGA
CCGATCTCGCGACTGAAATGGCTATCAAAGCCGTCGCTACTGTAGCTATCGAGGACAAAA
CGTCCGGACAACGGGAAATTGACATCAAGCGGTATGCAAAAGTAGAGAAGGTTCCCGGAG
GCGTGATCGAAGAATCGAGAGTGCTCCAAGGGGTCATGCTCAACAAAGACATCACCCATC
CGAGAATGAAGAGACGCATCGAAAATCCCAGAATTTTACTCTTGGACTGTCCTTTGGAAT
ACACGAAAGGAGAGAGCCAGGCCGACATTGAACTCTCGAAAGAGAACGACTTCAACCGGA
TCCTTCAGCTGGAGGAGGAGTACATCAGAAGGGTCACTTCCGAAATCATTGCCTTCAAAC
CAGACCTAGTTTTCACGGAGAAAGGCATATCAGGCCTCGCCCAGCATTTCCTGGTCAAGG
CCGGCATTACAGCCATCCGCCGAGTGCGCAAGTCCGACAACAATCGTATCGCGAGGGCCT
GCGGAGCCACCGTGTGTTCTCGAACCGACGAAATCCGCGAGGAAGATTTGGGAACCGGCG
CAGGCCTGTTCGAAATCCGTAAATTCGGCGACGAGTATTTCACCTTTATTACCGAGTGTA
AAAATCCTAAGGCGTGTACGATTCTTCTCCGCGGCGCCAGCAAAGATATTCTCATGGAGG
TGGAGAGAAATCTGCAGGATGCAATGCAAGTCGCCAGAAACGTGATGGTCGACGCCAGGC
TTGTGCCTGGCGGCGGCGCTGTGGAAATGGCCGTGGCCCAGGGAATGGCGGAAAAATCCA
AATCGATGACCGGCGTGGAGCAGTGGCCGTACCGAGCGGTAGCTCAGGCTTTGGAAGTCA
TCCCGCGAACGCTGATCCAAAATTGCGGCGCGAGCACCATTAGAACGATTACGGCTCTGC
GGGCCAAACACACGGAGCCTGACAACAAGACCTGGGGCGTCGACGGGGAAACGGGTCAAA
TCGCCGATATGACTGTGTTGAATATTTGGGAGCCGTTGTCGGTTAAGGTGCAAACGTACA
AGACCGCTATGGAGGCTGCGATGCTGCTGCTCCGAATTGACGATATTGTTTCTGGCGTGA
AGAAAACGGATAATTGAA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[1-483] 1.4E-264 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[1-96] 8.9E-73 - T[359-479] 8.9E-73 |
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[1-482] 6.4E-257 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[1-95] 1.5E-172 - T[359-476] 1.5E-172 |
| CDD |
Chap_CCT_gamma (IPR012719) - T[1-479] 0.0 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[1-478] 1.8E-156 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[9-27] 2.2E-23 - T[39-58] 2.2E-23 - T[327-349] 2.2E-23 - T[361-373] 2.2E-23 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[11-27] . - T[39-47] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[96-169] 1.5E-172 - T[323-358] 1.5E-172 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[96-169] 1.01E-24 - T[323-358] 1.01E-24 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[165-332] 2.41E-55 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[170-322] 1.5E-172 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPG_HUMAN | 73.237 % | 743 | 0 |
| TCPD_HUMAN | 32.851 % | 268 | 7.16E-84 |
| TCPE_HUMAN | 34.375 % | 281 | 9.74E-89 |