- Region 'REG00000417' >
- Transcript 'Boleac.CG.SB_v3.S106...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g10156.01.t
Possible name(s)
DHX30; DHX57; DHX9
Gene model
Location
chrUn [65,554,890 / 65,561,921]
Amino acid sequence
Length: 593
>Boschl.CG.Botznik2013.chrUn.g10156.01.p
MTEIKQFLYAWLGRQKLQPVYDIGSSGSKFKPRFKCELRVETIPYVGIGNSTNKKDAQAN
AAWDFAYYLVRTGKMKDAELPSKSGGAELPPEDAYVSIKEETGTVPGILPTPVRPESQEF
GQNNDNSRPPPGPAFGGFNVGAGPSERGGALHEYYDRKRKLEEEETFASEEVDMNSKLHG
NWTIDNAKSRLHEFFQKERISADYKYSQVGPDHNKSFIAEMTIYVKKLGKTLHAREHGSN
KKNASQSSALSLVRQLFHLGVIENYTGATRKKQSDEAEPYDVSVDPQIVNRLLASLSELG
IEPVKANVTEPEVQVNLVPAKTAFFEPAPRKTSAGVIPWSPPLANWNPWTSCNIDEGPLA
NLTPGQICNDLMNEYNYALENNPQIKKMIEERNQLPIFGYRDHLMQSIRDNAVIIVRGQT
GSGKTTQVPQYILEDMVSSGHASDCNIIVTQPRRISAVSVAERVAVERGEELGQSVGYSV
RFDSVLPRPHAGILFCTVGVLLRKLTAGLRGVSHVVVDEIHERDMNSDFLLVVLRDIVAT
YSGIRIVLMSATIDTTIFSQYFNNCPVVEVHGRTHPVQGELFFGITASSFVDF
Nucleotide sequence
Length: 1,782
>Boschl.CG.Botznik2013.chrUn.g10156.01.t
TGACTGAGATAAAGCAGTTTCTGTATGCCTGGCTGGGCAGGCAGAAGCTTCAACCGGTTT
ATGACATTGGTTCTAGCGGTTCCAAGTTCAAGCCACGATTCAAGTGCGAGGTGCGGGTTG
AAACGATTCCGTATGTCGGGATCGGAAATTCGACCAACAAGAAAGATGCCCAGGCTAACG
CGGCTTGGGATTTCGCTTACTATCTCGTGCGTACTGGAAAAATGAAGGATGCTGAGCTTC
CGTCTAAATCTGGTGGCGCAGAACTCCCGCCGGAAGATGCCTACGTGTCAATCAAAGAAG
AAACCGGAACAGTCCCTGGAATCTTACCTACTCCTGTGCGACCGGAGAGTCAAGAATTTG
GCCAAAATAATGACAATAGGCGTCCTCCACCGGGACCCGCATTTGGGGGTTTCAATGTCG
GGGCTGGGCCATCAGAAAGGGGTGGAGCTTTGCATGAATATTACGACCGCAAGCGAAAGC
TGGAGGAAGAGGAGGCGTTTGCTTCGGAAGAAGTCGACATGAATTCGAAATTGCACGGAA
ACTGGACGATCGACAACGCAAAGTCGAGATTGCACGAGTTTTTCCAGAAGGAACGGATAT
CGGCCGACTACAAATACAGTCAAGTTGGTCCGGATCATAACAAGAGCTTCATTGCTGAGA
TGACGATCTACGTGAAGAAGCTTGGCAAAAGTCTTCATGCGAGAGAGCACGGTTCAAACA
AAAAGAACGCATCCCAATCGTCGGCGTTGTCCTTGGTGCGGCAGCTGTTTCACTTGGGTG
TGATTGAGAACTACACCGGTGCTACTCGGAAGAAGCAAAGCGATGAGGCTGAGCCGTATG
ACGTTTCGGTCGATCCGCAGATTGTCAATAGGTTGCTGGCGTCTCTGTCCGAGCTGGGCA
TTGAGCCAGTCAAAGCCAACGTGACCGAACCAGAAGTGCAAGTGAACCTGGTCCCGGCCA
AGACGGCGTTTTTCGAGCCTGCTCCACGAAAAACGAGCGCCGGGGTCATTCCGTGGTCGC
CGCCCTTGGCTAATTGGAATCCGTGGACGAGCTGTAACATTGACGAAGGCCCCTTGGCTA
ATGTGACGCCTGGACAAATTTGCAACGATTTGATGAACGAATACAACTACGCTCTGGAGA
ATAATCCTCAGATCAAAAAGGTGATTGAAGAAAGGAATCAGCTTCCCATATTCGGCTACC
GAGATCATCTCATGCAATCGATCAGGGACAACGCCGTCATAATCGTACGGGGACAGACCG
GGTCCGGGAAAACGACTCAGGTCCCTCAATATATCCTCGAAGACATGGTGTCGTCCGGGC
ATGCGTCTGATTGTAACATCATCGTGACCCAGCCGAGACGTATCAGCGCCGTATCTGTGG
CGGAGCGGGTGGCAGTAGGACGTGGAGAGGAACTAGGGCAGAGCGTCGGGTACAGCGTTA
GATTTGATTCGGTGCTGCCCAGACCTCACGCCGGCATACTTTTCTGCACTGTTGGTGTGC
TTTTGCGCAAGCTAACTGCGGGTCTGCGAGGTGTTTCGCATGTCGTCGTCGACGAGATAC
ACGAGAGAGATATGAATGGCGACTTTCTGCTGGTCGTGCTCCGTGACATTGTCGCCACGT
ATTCCGGGATCCGCATCGTTCTCATGTCCGCCACCATCGACACGACCATCTTCTCGCAGT
ATTTCAACAACTGCCCGGTGGTGGAAGTTCATGGACGTACGCATCCTGTGCAGGGTGAGT
TATTTTTCGGTATTACGGCTAGCAGTTTCGTTGACTTTTAGC
| ProSiteProfiles |
dsRBD_dom (IPR014720) - T[1-71] 13.203 - T[186-258] 17.185 |
| SMART |
dsRBD_dom (IPR014720) - T[4-70] 2.0E-8 - T[187-257] 8.1E-13 |
| Pfam |
dsRBD_dom (IPR014720) - T[5-62] 1.9E-5 - T[187-256] 1.7E-9 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[393-588] 4.1E-23 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[405-571] 19.261 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[405-553] 2.28E-30 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[405-555] 4.6E-8 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[513-522] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX30_HUMAN | 39.677 % | 209 | 6.73E-58 |
| DHX9_HUMAN | 54.498 % | 657 | 0 |
| DHX57_HUMAN | 46.977 % | 209 | 9.02E-58 |