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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g09943.01.t
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
chrUn [64,307,065 / 64,308,163]
Amino acid sequence
Length: 365
>Boschl.CG.Botznik2013.chrUn.g09943.01.p
MAEVHSFGVQPVCVHAWNADRSQIAISPNSNEVEIYQKSGRQWNKIHTLTEHTGRVTGID
WAPKSKRLVTCSSDRNAYVWTLDNNQWKPTLVILRINRAATCVKWSPNEDKFAVGSGARV
ISVCYFEQENDWWVSKHIKKPIRSTILSIDWHPNNILIAAGSSDFKARVFSGYIKDIEPK
PSSTNWGKKMTFGNVMQEFSMPSDGWVQGVKFSASGEKLAFVSQDSSIGVAYGGNESVAI
KTSHLPFCDCTWLTEYSVIAVGHDCNPMLFSTDDTCSTLTFINRLDQASKGGGAKAMSAM
DRFKMMDKKASTNTEGDDIKTKHKNSITQVVNYGKDKFSTSGMDGSVIIWDCKSLESSIS
GLRIK
Nucleotide sequence
Length: 1,098
>Boschl.CG.Botznik2013.chrUn.g09943.01.t
GATGGCAGAAGTTCACAGTTTCGGCGTTCAACCGGTATGCGTTCACGCCTGGAATGCCGA
CCGCAGCCAGATCGCAATCAGCCCGAATAGTAATGAGGTTGAGATCTATCAGAAGAGCGG
GCGTCAATGGAACAAAATCCACACGTTAACAGAACACACTGGACGAGTCACCGGTATCGA
CTGGGCCCCGAAAAGCAAACGCCTAGTGACCTGTTCTAGCGATAGAAACGCGTACGTTTG
GACCTTGGATAACAACCAGTGGAAACCTACCCTCGTAATTCTGCGTATCAACCGTGCTGC
GACCTGTGTAAAATGGTCGCCGAACGAAGATAAATTCGCTGTTGGAAGTGGAGCCCGTGT
AATTTCGGTATGCTACTTCGAACAAGAAAACGATTGGTGGGTGAGCAAGCATATTAAGAA
GCCGATAAGATCAACTATCTTAAGCATTGATTGGCATCCTAATAATATCCTGATTGCTGC
CGGATCGTCCGATTTCAAAGCGAGAGTGTTTTCTGGGTACATCAAAGATATTGAACCCAA
GCCCAGTTCAACAAATTGGGGAAAAAAGATGACATTCGGCAACGTCATGCAGGAATTCTC
GATGCCTTCAGACGGATGGGTGCAGGGTGTGAAGTTCTCTGCGTCGGGAGAAAAACTGGC
TTTTGTCTCTCAAGACAGTTCGATTGGAGTAGCATACGGTGGCAATGAATCAGTCGCTAT
CAAAACGTCACATCTTCCATTTTGTGACTGCACTTGGCTGACTGAATATAGCGTCATCGC
AGTGGGTCATGATTGTAATCCAATGCTTTTTAGCACGGATGACACGTGTTCGACCTTGAC
TTTCATCAATCGATTGGACCAGGCCTCCAAAGGCGGCGGAGCGAAAGCCATGTCTGCCAT
GGACCGCTTCAAAATGATGGACAAGAAAGCTTCGACCAACACGGAAGGTGATGACATCAA
GACGAAGCATAAGAATAGCATCACTCAAGTGGTGAATTACGGCAAGGATAAGTTTTCCAC
CAGTGGCATGGATGGGAGTGTCATCATATGGGATTGCAAGTCTCTGGAATCTTCGATTTC
GGGACTTCGCATCAAATA
| PIRSF |
ARPC1 (IPR017383) - T[1-357] 1.5E-147 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-352] 8.4E-146 |
| PANTHER |
ARC1A (IPR030140) - T[4-364] 6.1E-152 |
| PANTHER |
ARPC1 (IPR017383) - T[4-364] 6.1E-152 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[10-356] 2.93E-45 |
| SMART |
WD40_repeat (IPR001680) - T[42-81] 2.3E-8 - T[86-125] 3.7 - T[135-171] 0.55 - T[192-232] 57.0 - T[312-351] 6.5 |
| Pfam |
WD40_repeat (IPR001680) - T[43-80] 3.0E-5 - T[141-170] 0.063 - T[322-351] 0.14 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[49-90] 11.814 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[49-90] 12.614 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 59.892 % | 449 | 1.37E-158 |
| ARC1B_HUMAN | 57.258 % | 433 | 3.48E-152 |