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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g07890.01.t

Possible name(s)

NCAPD2; NCAPD3

Location

chrUn [51,594,799 / 51,598,477]

Sequences

Amino acid sequence

Length: 846

>Boschl.CG.Botznik2013.chrUn.g07890.01.p
MAVKQVIKSLVKLAIHFQTNCPLSIIDFPSFKADGSSAYNLSMAYQLVVYALFLVVSVKH
GDLDHVALILFRFTLQILIMKNATCSSSVPRAYYQNAEIFRRLVCHLFDVHGSAVEHGIS
VLTQNMIAQCPDRVEYRNHCAVVVACILNHMPLKWFAEFCDWLRRVSVHVKITYRSNAVA
VVSKLLCQSERRSTQGCEGQSFDSAKHGLLLEIVVARLMDVAPSVRSRSLAALVEIMEAG
VVSPSVLGSVTSGQNKDSERLTPVAIGSVSEGIATPPTLHSVPASMINQSENALNQTSLM
HLLKKCTLEMKSMVRKTAVHAVQMAFNYGFVAPNAESLDVISVRCRDPSVAVRKFAVGSI
TSVLLHHSNSPEAVLAWSRGVLPALLDGENSVQEKALQLVQELIIDNISAAGDKKELAWK
LMGFISSAEGDSSRTYFKMACKLLKRQSKLGALSMNQIIDKLSDTEYSAAAWSFLQIYTL
YHCDKKASDKVFKVWSEELKKEKPLIVHINAVLVIGQVCKSLSEEFQKQALNACCGWLKN
LKCPVQLVAYLVQTILNLIEAMHRDKSSSDEWPRPLMHWGEVTLKQVDEFLYKFVILNAD
NDAVVNKQSLIHQLHVAGNVGMHCTEKVPKRLLLTMQALLTSTECLTEIPRNPEQSSQDM
PQSQPLSQFVQGGGVPANVRAHALINLGKICLNNESLAKKCVHAMVRELDSSTNEMLKIN
VLAVLTDLCVQQTQLVDSHIPDIANCLGDESVAVRKNALVLISDLLKKDFVKWRGSLIYK
FLALLCDPSAEIRDLVRYSFTNQTLQRNAGDTFFRHFVEAVFYLNSYTKHNTYNRFAKSA
RETRYQ

Nucleotide sequence

Length: 2,541

>Boschl.CG.Botznik2013.chrUn.g07890.01.t
TGGCCGTGAAACAAGTGATTAAATCGCTGGTGAAACTAGCTATCCACTTTCAAACCAATT
GCCCGTTGTCTATCATAGATTTTCCGTCATTCAAAGCCGATGGATCCAGCGCCTATAACT
TATCTATGGCGTATCAGCTGGTTGTGTATGCTCTGTTTCTCGTGGTATCGGTCAAACACG
GGGATCTCGACCATGTGGCGTTGATCTTGTTTCGATTCACACTGCAGATTTTGATAATGA
AAAATGCCACGTGCTCGTCATCGGTTCCCCGTGCATATTATCAAAACGCTGAGATTTTTC
GAAGGCTTGTCTGTCACTTGTTCGACGTTCACGGCAGTGCCGTTGAGCACGGTATCTCTG
TGTTAACACAAAATATGATCGCTCAATGTCCCGATCGAGTCGAATACCGCAACCATTGTG
CGGTTGTGGTGGCTTGCATTCTAAATCACATGCCGCTGAAATGGTTCGCCGAATTCTGCG
ACTGGCTAAGACGCGTCTCTGTGCACGTCAAGATTACTTACAGAAGTAATGCGGTGGCGG
TCGTATCTAAACTTTTGTGTCAATCTGAGCGTCGGTCGACACAAGGTTGCGAAGGGCAAT
CGTTTGATTCTGCGAAGCATGGACTTCTACTTGAAATAGTGGTGGCGAGGTTAATGGACG
TGGCACCATCTGTGCGCAGCCGGTCTTTGGCTGCACTTGTGGAAATCATGGAAGCAGGAG
TTGTGTCCCCATCGGTTTTAGGCTCTGTCACTAGCGGTCAAAATAAAGATTCGGAAAGAC
TTACCCCTGTTGCAATCGGCTCTGTCAGCGAAGGCATCGCTACCCCGCCGACGTTACATT
CTGTACCCGCTTCTATGATCAATCAAAGCGAGAATGCGTTGAATCAAACGTCCTTGATGC
ACCTTCTCAAGAAGTGCACGCTCGAAATGAAGTCCATGGTTCGGAAAACAGCAGTGCATG
CCGTTCAGATGGCTTTTAACTACGGATTTGTAGCGCCAAATGCTGAAAGTTTAGACGTTA
TTTCAGTGAGGTGTCGAGATCCGTCAGTTGCGGTGAGGAAATTTGCAGTAGGGAGTATCA
CGTCTGTACTTTTGCATCACTCGAATTCACCAGAGGCGGTGTTGGCTTGGTCTAGAGGTG
TTTTGCCCGCTTTGCTAGACGGTGAGAATTCTGTGCAGGAAAAAGCGTTACAACTAGTTC
AAGAATTGATCATCGATAACATATCTGCGGCTGGCGACAAGAAGGAACTCGCTTGGAAAC
TGATGGGATTTATATCTTCAGCTGAAGGTGATTCCTCCAGGACATACTTCAAAATGGCAT
GTAAGCTACTGAAGCGTCAATCGAAACTAGGCGCGTTATCGATGAATCAGATCATTGACA
AACTGTCTGATACCGAGTATTCTGCTGCGGCTTGGTCTTTCCTACAGATATACACGTTGT
ATCACTGCGACAAGAAGGCTTCGGATAAGGTCTTCAAAGTATGGTCGGAGGAGCTGAAGA
AAGAGAAGCCTCTCATTGTTCACATCAACGCAGTCTTGGTAATTGGACAAGTATGCAAGT
CTTTGTCGGAGGAGTTTCAGAAACAGGCGCTCAACGCGTGTTGCGGATGGTTGAAAAACC
TAAAATGCCCAGTGCAACTTGTAGCGTATCTCGTCCAGACGATACTGAATCTTATTGAAG
CGATGCATCGAGATAAATCCTCCTCAGACGAATGGCCTCGACCTCTCATGCACTGGGGAG
AAGTTACTTTGAAACAAGTCGACGAATTCCTTTATAAGTTTGTGATCTTGAACGCGGACA
ACGATGCCGTGGTTAATAAACAATCACTGATTCATCAGCTGCACGTGGCAGGCAATGTGG
GTATGCATTGCACCGAGAAAGTTCCAAAACGTCTGCTTCTGACGATGCAAGCGCTGCTCA
CTAGTACGGAGTGTCTGACGGAGATACCGCGTAATCCAGAACAATCGTCGCAGGACATGC
CGCAATCGCAACCTTTGTCGCAGTTCGTGCAGGGTGGCGGGGTGCCTGCTAATGTCCGGG
CACATGCTCTCATTAATTTGGGTAAAATATGCTTGAACAACGAATCGTTGGCCAAAAAAT
GCGTTCACGCAATGGTTCGAGAACTGGACTCGAGCACGAACGAAATGCTGAAAATCAACG
TACTTGCTGTGTTGACGGATCTTTGTGTGCAGCAAACTCAACTCGTGGACTCGCACATAC
CGGATATTGCGAATTGCCTGGGAGACGAGTCTGTTGCTGTGCGAAAGAATGCTCTGGTTT
TAATCAGCGATCTTTTGAAAAAAGATTTCGTGAAATGGCGCGGCAGCCTCATCTACAAGT
TCCTGGCTTTGCTATGCGATCCTAGCGCCGAAATTCGGGATCTCGTGCGGTACAGTTTCA
CCAACCAAACGTTGCAACGAAACGCGGGAGACACATTCTTCAGGCATTTTGTGGAGGCGG
TATTCTATCTAAATTCATATACGAAGCACAATACCTACAACCGATTTGCGAAGTCAGCGA
GAGAAACCAGGTACCAGTAAC

InterProScan

PANTHER
CND1/NCAPD3 (IPR026971) - T[3-839] 3.7E-149
SUPERFAMILY
ARM-type_fold (IPR016024) - T[131-242] 8.23E-27 - T[292-407] 8.23E-27 - T[446-550] 8.23E-27 - T[644-837] 8.23E-27
Gene3D
ARM-like (IPR011989) - T[636-810] 3.0E-7
Pfam
Cnd1_C (IPR032682) - T[717-827] 2.6E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNDD3_HUMAN 29.714 % 329 2.99E-96