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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g07511.01.t

Possible name(s)

SCFD2; STXBP3

Gene model

Boschl.CG.Botznik2013.chrUn.g07511

Location

chrUn [48,938,369 / 48,940,424]

Sequences

Amino acid sequence

Length: 684

>Boschl.CG.Botznik2013.chrUn.g07511.01.p
MKLVHVCFKSSRRHDDRDLLDWILPISGYMEIFKKTSLSIWKSIAKLVKNSIIFIDNYSA
ECLHWCGGVDLLFENGAVCVKEFSSFESGNPNQNNAVFIISSPIAGETESILQDIIKSSS
FSKCLLVCGLDSQVHSYASGDESFNEMYFEELCAKVSSWNKRKRCSVEAIHFPIFMAPIA
DNAFVTPAFDMIFPVQKHDLDKLEIPGGGSNAVSLQDLHFYMFPREYRTLLRMTAGSFRS
FFHNLQCKEEIFAVGPTSKVLSTQLSNLSNQNKSSYPNKIGILFVDRTLDLMSAVTHSEK
SLVDQLLGILPGFPCHYNNIAIDMSLLCTTQTSRIDDDLIYSGCLVPDSKALSLLSYGIN
NKSTDSVDMVKEKLITAVEEEGLEDDLDLDKYDSLQTIKGLVKAFQGNPGGILYNSAVLQ
FALAVVQLLEDPVLDVWKTLSTKEKLILQQLGDEPDGIVKSLSRIAEEETMCFQDICSLL
IYASCTLSACGDSQNTLSSMIYKVLSKTEFSALSESFITRYHLDEKSWEDPSKLSSVSDD
ITDTITNLRSNYLQRMNTLKLSEIEPPLHQPLLPQVTERIFNQNKPELQPDIEHVTTGRS
DLLKLGMSMFRKVVPPRPCDYPVLVIYVVGGITTSEVAQINKALEKYSSGSDCQVVIGSN
RLVSPSDIVDSVLFDDNLHPDVRC

Nucleotide sequence

Length: 2,055

>Boschl.CG.Botznik2013.chrUn.g07511.01.t
TGAAATTAGTTCATGTCTGCTTCAAGTCAAGTAGGAGACACGACGACAGAGATTTGCTGG
ACTGGATACTGCCAATCAGTGGTTATATGGAGATATTTAAGAAGACGAGTCTCTCGATAT
GGAAGAGTATTGCGAAACTCGTAAAGAATTCTATTATCTTCATAGACAATTATAGTGCAG
AATGCTTGCATTGGTGTGGAGGGGTTGACCTACTCTTCGAAAATGGTGCTGTGTGCGTGA
AGGAATTTTCGTCCTTCGAAAGTGGCAATCCGAATCAAAACAATGCAGTTTTTATTATCT
CCTCGCCAATTGCCGGAGAAACTGAAAGCATTCTTCAAGATATCATAAAATCCAGTAGCT
TCTCGAAGTGCCTGTTGGTATGCGGACTAGATTCACAAGTTCACAGTTACGCAAGTGGCG
ATGAAAGTTTCAATGAGATGTATTTTGAAGAGCTCTGCGCCAAAGTCTCAAGTTGGAATA
AACGTAAAAGGTGCAGCGTTGAGGCAATACATTTTCCAATATTTATGGCACCGATTGCCG
ACAATGCCTTTGTAACACCTGCGTTTGATATGATATTTCCTGTGCAAAAGCACGATTTGG
ATAAGCTTGAGATACCGGGTGGAGGATCCAATGCTGTATCTTTGCAAGATTTGCATTTCT
ACATGTTCCCGAGAGAGTATAGAACTCTATTAAGGATGACAGCGGGTTCATTTAGAAGCT
TTTTCCACAACTTGCAATGCAAAGAAGAAATATTTGCAGTGGGACCTACAAGCAAAGTAC
TGTCCACACAACTCTCAAATTTGTCAAATCAGAACAAATCATCCTACCCGAACAAGATTG
GAATTCTTTTCGTGGATAGAACACTGGATTTAATGTCGGCTGTTACACACTCCGAAAAAT
CACTTGTTGACCAGCTGCTTGGGATATTACCAGGGTTTCCTTGTCACTACAACAACATTG
CTATTGATATGTCGCTTCTTTGCACCACACAAACTAGCAGAATTGATGATGATTTGATTT
ACTCTGGCTGTCTGGTGCCAGACAGCAAAGCACTGTCTCTCCTCTCATACGGCATCAATA
ATAAATCAACAGATTCTGTCGATATGGTGAAAGAAAAACTGATCACTGCTGTAGAGGAGG
AAGGACTTGAGGACGATTTGGATTTGGATAAATACGATTCGCTGCAGACGATAAAAGGTT
TGGTTAAAGCTTTCCAAGGCAATCCCGGGGGGATTCTTTACAACTCTGCGGTGCTACAAT
TTGCGCTTGCTGTTGTCCAGCTATTAGAGGACCCCGTTTTAGATGTTTGGAAAACATTAT
CTACAAAAGAGAAGTTGATACTGCAACAACTAGGCGATGAGCCTGACGGCATTGTCAAAA
GCTTGTCCAGAATTGCTGAAGAAGAGACTATGTGCTTCCAAGATATTTGTTCCTTATTAA
TCTACGCTAGTTGCACGTTGAGTGCCTGCGGTGACTCCCAAAATACTTTGAGCAGCATGA
TTTACAAGGTATTATCGAAAACAGAGTTTTCTGCTTTGTCCGAGAGTTTCATAACACGGT
ACCATCTTGACGAAAAGAGCTGGGAGGATCCTTCAAAACTGTCATCTGTAAGCGACGACA
TTACTGATACCATCACCAATCTTCGATCGAATTATCTTCAGCGAATGAACACACTGAAAT
TGAGCGAAATCGAACCTCCATTGCACCAACCCCTCTTGCCTCAAGTCACGGAAAGGATAT
TTAACCAAAATAAGCCTGAGCTACAACCTGATATTGAGCATGTCACCACCGGTCGGTCGG
ACCTTTTGAAACTCGGGATGAGCATGTTCCGAAAAGTAGTACCGCCACGTCCGTGCGATT
ACCCGGTTTTGGTGATTTACGTCGTGGGTGGGATCACAACATCTGAAGTGGCTCAAATCA
ACAAAGCACTAGAAAAGTATTCGTCGGGTAGTGATTGCCAGGTAGTTATAGGTTCCAACA
GGCTTGTTTCGCCCTCAGATATCGTTGACTCTGTGCTTTTTGACGATAACTTGCATCCTG
ATGTGAGGTGTTGAA

InterProScan

PANTHER
Sec1-like (IPR001619) - T[40-676] 3.3E-76
SUPERFAMILY
Sec1-like_sf (IPR036045) - T[50-186] 1.44E-6 - T[214-299] 1.44E-6 - T[538-672] 9.81E-12
Pfam
Sec1-like (IPR001619) - T[470-670] 5.9E-8
Gene3D
Sec-1-like_dom2 (IPR027482) - T[539-673] 1.2E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SCFD2_HUMAN 29.412 % 267 7.2E-80