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TRANSCRIPT CARD

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  1. Region 'REG00000836' > 
  2. Transcript 'KH2012:KH.L137.2.v1....' > 
  3. EST 'AHC0AAA235YN19_RM1' > 
  4. Transcript 'Harore.CG.MTP2014.S4...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g07450.01.t

Possible name(s)

DMBX1; OTX1; RAX2

Gene model

Boschl.CG.Botznik2013.chrUn.g07450

Location

chrUn [48,574,063 / 48,575,906]

Sequences

Amino acid sequence

Length: 174

>Boschl.CG.Botznik2013.chrUn.g07450.01.p
MTREQLALFTNLPEARVQVWFKNRRAKFRKQQRLDAGTMDSAKIEDKLDDKLDQKKVRTS
DEDNVQQNLAKNDRKSDLENSTDLNTCNFTPCDMSKANCSHNNAPPTNNIPMFWNQSPQL
SAQMIAISQGLLPFSCTSFPFPANPFSTSHMPKNEYTIDEKVFTSDLSSTESST

Nucleotide sequence

Length: 525

>Boschl.CG.Botznik2013.chrUn.g07450.01.t
TGACCAGAGAGCAGTTGGCTCTTTTTACCAATCTGCCGGAAGCGAGAGTTCAGGTCTGGT
TCAAAAATAGACGAGCCAAGTTTCGCAAGCAACAGCGTCTGGACGCAGGGACTATGGATT
CTGCGAAAATTGAGGACAAGTTAGATGATAAACTTGATCAAAAGAAAGTACGAACGAGCG
ACGAAGACAACGTTCAACAGAACCTTGCGAAGAATGACAGAAAAAGTGATTTAGAAAACA
GCACGGACTTGAACACCTGCAACTTCACCCCGTGTGATATGTCAAAGGCAAATTGCAGCC
ATAACAATGCACCTCCGACAAATAACATTCCAATGTTCTGGAACCAATCGCCACAACTGT
CTGCCCAAATGATTGCTATATCACAGGGCTTGCTACCTTTTTCGTGTACAAGTTTTCCAT
TTCCTGCAAACCCATTTTCAACATCACATATGCCGAAGAATGAATACACAATCGACGAGA
AAGTATTCACCAGCGACCTATCAAGCACTGAGTCTTCGACTTGAG

InterProScan

ProSiteProfiles
Homeobox_dom (IPR001356) - T[1-31] 12.131
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[2-34] 1.15E-11
Pfam
Homeobox_dom (IPR001356) - T[2-30] 4.5E-9
CDD
Homeobox_dom (IPR001356) - T[2-32] 6.62528E-10
ProSitePatterns
Homeobox_CS (IPR017970) - T[6-29] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value