- Region 'REG00001031' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g06979.01.t
Possible name(s)
NFX1; NFXL1; ZNFX1
Gene model
Location
chrUn [45,683,869 / 45,686,932]
Amino acid sequence
Length: 1,020
>Boschl.CG.Botznik2013.chrUn.g06979.01.p
MDAFYNGNHQYYFPLSHLGMPQQIGSSNNYAQWSTPDDTSNSVPVDVETRATSSGGNTKS
RRFSKRRNVKEGEGSRSKSLQSPNSHQNNQKGVVRFSHQKKDSEAVTSSVATPENDSVDV
DEPDGGKVKESRKKTEVKEQVRKQTASKKKKHKLLKESSESQLGVLIEQLTDGTYECMVC
CDRVKQQHAVWNCDSCFHVFHMVCIKKWARSPSAHVNDGGWRCPGCQNVNKKFPSLYKCY
CGKVREPEWNRRETPHSCGEVCGKKRNYNAVCTHPCNILCHPGPCPPCPASVIKSCQCGK
ISKKVRCSQQKPLLCEEVCGKMKNCGIHKCDVVCHSGDCNECRILVDQSCFCGKDKRQVL
CGSAESRHVPESEGGGVYICDRVCGKSLSCANHVCEEICHPGQCPDCSLTPENLKTCPCG
RTKLSELLNESGSAFVRTSCADPIPTCSLICGKPLSCGGELVHTCKLECHTGPCPPCEDG
ISPVRCRCGKSEQDVPCTEISTEPYICDRRCNKKRKCGRHKCGKICCTDDEHVCMQICGR
KLECKLHRCEDTCHRGNCHACYNVSFEELACHCGAEVLFPPLPCGTKPPECQRLCVRQHS
CYHSVNHNCHNEEKCPPCVVLMKKQCNCGKVLRSNIPCHQTNVSCGQPCKKTLPCGHNCL
KLCHPDSCMEEEEKCAQPCSIMRVECIHPCAVPCHQGQACPPSKCKALVTLKCACGNRKK
QVECSESDATLQRLSSESVARQHASVDIRGIFKCSDGKQALACNDECAVLERNRRLAEAL
DIQETKMEESEQPKHTDFLLAWAKKEPSFVQWVEQELTNLIDAISWLNQPKRSFSFPSMK
RDKRQVVHELAETMHCKSVSVDEEPNRSVVITAVRGVSKIPRTLVSDSLRSKVKISGFVK
AGNTNEASDSATVHQRRVLSTMKMVSMSSGGTSSENRTGIVSSQTTVKSASTPKIPTQNT
SMLPKNLGAAYSSVGRPVGASANSVQMLRSQPKPMRDHTEASARAPETKNPEIDYFDMTE
Nucleotide sequence
Length: 3,063
>Boschl.CG.Botznik2013.chrUn.g06979.01.t
TGGATGCTTTTTATAACGGAAATCACCAATATTATTTTCCTCTATCTCATCTTGGAATGC
CTCAGCAGATTGGATCAAGTAATAATTATGCGCAATGGTCTACTCCTGATGATACGTCCA
ATTCTGTGCCTGTTGATGTGGAGACTAGAGCGACCAGTAGCGGTGGCAACACAAAGTCTC
GACGATTCAGCAAGAGGCGTAACGTGAAAGAAGGGGAAGGCTCGAGAAGCAAATCATTGC
AGAGCCCAAATTCACATCAAAACAATCAAAAAGGCGTGGTTCGTTTTAGTCATCAGAAAA
AGGACTCCGAGGCTGTTACCAGCAGTGTGGCTACCCCTGAAAACGATAGTGTTGATGTGG
ATGAGCCTGACGGTGGAAAAGTCAAAGAGTCTCGCAAAAAAACAGAAGTAAAAGAGCAAG
TACGCAAGCAGACTGCCTCCAAGAAAAAGAAACATAAGCTATTGAAAGAGTCTTCCGAGA
GTCAACTGGGTGTTCTGATCGAGCAGCTAACGGACGGGACGTACGAATGTATGGTGTGCT
GCGATAGAGTCAAGCAACAGCACGCCGTGTGGAATTGTGACAGTTGCTTTCATGTCTTCC
ATATGGTGTGTATAAAGAAATGGGCGAGATCACCATCGGCTCATGTCAATGACGGCGGAT
GGCGCTGCCCTGGATGTCAGAACGTGAATAAGAAGTTTCCAAGCTTGTACAAATGTTACT
GCGGCAAAGTTAGAGAGCCAGAGTGGAATCGTCGTGAAACGCCGCATTCCTGCGGAGAAG
TATGCGGTAAAAAGAGGAACTACAACGCTGTGTGTACTCACCCGTGTAACATACTGTGCC
ATCCCGGGCCGTGCCCTCCTTGTCCCGCGAGTGTTATCAAATCTTGTCAGTGTGGAAAAA
TCTCAAAAAAAGTAAGATGCAGCCAGCAAAAACCGCTGCTGTGCGAGGAAGTGTGTGGTA
AGATGAAAAATTGTGGTATTCATAAGTGCGATGTCGTGTGTCATTCCGGTGATTGTAACG
AATGTCGAATTCTAGTCGATCAGTCGTGTTTTTGCGGAAAAGATAAACGCCAAGTCTTGT
GCGGGTCTGCCGAGTCTCGACATGTTCCTGAAAGTGAGGGAGGCGGCGTGTATATTTGTG
ATCGTGTATGCGGAAAGTCCTTGTCGTGCGCTAATCACGTTTGCGAAGAAATCTGCCATC
CGGGACAGTGTCCAGATTGTTCTTTGACACCGGAAAATCTCAAGACGTGCCCGTGTGGTC
GCACTAAATTGTCCGAACTGCTTAACGAGAGCGGCAGTGCGTTTGTGCGTACATCGTGCG
CGGATCCAATCCCGACGTGTAGTTTAATTTGTGGTAAGCCTTTGAGCTGTGGTGGTGAAT
TGGTTCACACATGCAAACTCGAATGTCACACGGGTCCCTGCCCACCTTGCGAAGACGGAA
TATCGCCCGTTCGATGTCGCTGCGGCAAGTCCGAGCAGGATGTGCCGTGCACGGAAATCT
CAACAGAGCCTTACATTTGCGATCGCAGGTGCAATAAGAAGCGAAAATGCGGCCGGCACA
AGTGCGGAAAAATCTGCTGCACCGACGACGAACACGTGTGCATGCAAATTTGCGGTCGGA
AACTGGAGTGTAAGTTGCACCGTTGCGAAGACACCTGTCATAGAGGCAACTGTCACGCGT
GCTACAACGTCAGCTTCGAAGAATTGGCGTGTCACTGCGGAGCCGAAGTCCTGTTCCCTC
CTCTTCCGTGCGGTACGAAACCTCCGGAATGTCAAAGGTTGTGCGTGAGGCAGCACTCGT
GCTATCATTCCGTCAACCACAACTGCCATAACGAAGAGAAATGTCCGCCTTGCGTGGTTC
TCATGAAGAAGCAGTGTAATTGCGGGAAAGTACTACGCAGCAACATTCCATGCCATCAGA
CCAACGTGTCGTGTGGGCAGCCTTGCAAAAAGACGCTGCCGTGCGGGCACAACTGTTTGA
AATTGTGCCACCCGGATTCGTGTATGGAGGAGGAAGAGAAATGCGCGCAGCCCTGCTCGA
TAATGCGAGTCGAATGTATTCACCCGTGCGCTGTGCCGTGTCATCAGGGCCAAGCCTGTC
CGCCGTCAAAGTGTAAGGCTCTTGTAACTTTGAAGTGTGCGTGTGGAAATCGGAAGAAAC
AAGTCGAATGCTCGGAAAGTGATGCGACCCTACAGCGGTTATCGTCGGAGTCTGTTGCCA
GACAACATGCCTCCGTTGACATCAGAGGAATTTTCAAGTGTTCCGATGGAAAACAAGCTC
TGGCTTGTAATGACGAATGTGCAGTGCTGGAGCGAAATCGTAGGCTTGCCGAAGCGCTTG
ATATCCAAGAGACGAAGATGGAAGAATCGGAGCAGCCGAAGCATACCGATTTTCTTCTGG
CCTGGGCCAAAAAGGAACCGAGCTTCGTGCAGTGGGTGGAGCAGGAATTGACCAATTTGA
TCGACGCGATATCATGGCTCAACCAACCTAAACGCAGCTTCAGCTTTCCTTCGATGAAAC
GCGACAAAAGACAAGTCGTGCATGAGCTTGCGGAAACTATGCATTGTAAATCGGTCAGTG
TCGACGAGGAGCCTAACCGCAGCGTTGTGATAACTGCCGTGCGCGGCGTTAGTAAGATTC
CGAGGACTTTGGTGTCCGACAGCTTGAGGAGTAAAGTGAAGATATCCGGCTTTGTAAAGG
CTGGTAATACGAACGAGGCGTCGGACAGCGCGACGGTTCATCAGAGAAGGGTGCTCAGCA
CCATGAAGATGGTTTCTATGTCGTCTGGTGGCACGTCGTCCGAAAATCGGACTGGGATAG
TCTCGAGTCAGACGACTGTGAAATCTGCTTCCACTCCAAAGATTCCCACTCAAAATACTT
CAATGCTGCCCAAGAATCTTGGTGCTGCTTACTCATCTGTGGGAAGGCCCGTCGGGGCAA
GCGCCAATTCGGTTCAGATGTTGAGGTCGCAACCGAAACCAATGAGAGATCACACTGAAG
CTTCAGCGCGTGCTCCGGAAACGAAGAATCCCGAAATTGACTACTTTGATATGACGGAAT
AAT
| PANTHER |
NFX1_fam (IPR034078) - T[39-951] 1.3E-296 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[174-229] 9.294 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[177-227] 10.822 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[177-226] . |
| SMART |
Znf_NFX1 (IPR000967) - T[272-290] 0.033 - T[325-344] 1.5E-4 - T[390-409] 7.4E-4 - T[457-479] 0.19 - T[517-536] 16.0 - T[544-563] 0.66 - T[601-620] 5.3 - T[655-677] 0.17 - T[686-707] 5.3 |
| Pfam |
Znf_NFX1 (IPR000967) - T[273-289] 0.094 - T[325-343] 2.1E-5 - T[390-408] 0.0069 - T[457-477] 0.0076 - T[517-527] 6.3 - T[538-561] 0.16 - T[655-679] 6.8 |
| SMART |
R3H_dom (IPR001374) - T[793-874] 1.8E-9 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[796-892] 1.1E-14 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[802-879] 7.5E-10 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[807-875] 12.191 |
| Pfam |
R3H_dom (IPR001374) - T[809-872] 6.2E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFXL1_HUMAN | 34.109 % | 253 | 9.69E-71 |
| NFX1_HUMAN | 45.318 % | 705 | 0 |