Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g04897.01.t

Possible name(s)

PISD

Gene model

Boschl.CG.Botznik2013.chrUn.g04897

Location

chrUn [32,261,950 / 32,263,339]

Sequences

Amino acid sequence

Length: 462

>Boschl.CG.Botznik2013.chrUn.g04897.01.p
MYHWTSSFANHVKNSVPEAGYGRIQSVFRSKPNLLGQKLWNHPVLKSVSSCPNLYSALPF
PGQGLKKNAIKVNDSKRMQSFVEKRKRDQEWGRRFFPVFPDLLNYLKFLAVTSSGILVGW
IFYPDFVDRNSALSDPTLEYNPHVAHRVEDSNLMLRVYMGIPWRALSRAWGRFNATIDLP
VYLRPYLYGMFGRVYGVKFDEAVDPDPKSYSNFSEFFRRPIKSSVRPIDAGVDLVSPSDG
KILHFGKVVNGSVEQVKGVTYSLQKFLGPLHFDPVHEEWGEKDQHAHDWCAVPLPNYAKA
LLHYPEENDLYHCVIYLAPGDYHRFHSPTDWIVQHRRHFPGDLLSVNPKLASVVPSLFVL
NERVALMGKWKHGFFSMTAVGATNVGSVDIYGDLTLKTNRPKRVYGAYYDAKYDDVPALK
GIGMGEFNLGSTIVLIFEAPKDFEYAVESSDKICYGKALQKV

Nucleotide sequence

Length: 1,389

>Boschl.CG.Botznik2013.chrUn.g04897.01.t
CATGTATCATTGGACGTCATCGTTTGCAAACCATGTTAAAAATTCTGTTCCTGAGGCTGG
CTATGGAAGGATTCAAAGTGTATTTCGGAGTAAACCAAATTTACTTGGCCAGAAGTTGTG
GAACCACCCAGTATTGAAGTCGGTGAGCTCATGTCCCAATCTATACTCGGCACTGCCCTT
TCCTGGGCAAGGTCTAAAAAAGAACGCCATCAAAGTAAATGATTCTAAGAGGATGCAGTC
ATTTGTAGAAAAACGCAAAAGAGACCAGGAATGGGGACGGCGCTTTTTCCCGGTATTTCC
AGACCTACTAAACTACTTGAAATTCCTCGCAGTGACGTCATCCGGTATTTTGGTCGGATG
GATATTTTATCCAGATTTTGTCGATCGCAATTCCGCACTTTCCGATCCAACCCTGGAATA
CAATCCGCACGTTGCACATCGTGTTGAGGATTCCAATTTAATGTTGCGGGTATATATGGG
TATCCCGTGGCGCGCTTTGTCCCGTGCTTGGGGCAGGTTCAATGCCACCATTGATTTACC
GGTGTATCTGAGACCGTATCTGTACGGTATGTTCGGGCGAGTGTATGGCGTTAAATTCGA
TGAAGCGGTCGATCCAGATCCAAAAAGCTACTCCAATTTTTCAGAGTTCTTTCGTAGGCC
GATAAAAAGCAGCGTCAGACCAATAGATGCGGGAGTGGATCTTGTAAGCCCTTCTGACGG
CAAGATATTGCATTTTGGTAAAGTGGTCAATGGATCTGTGGAGCAAGTCAAAGGGGTTAC
TTACTCTTTGCAAAAATTTCTGGGTCCTCTACATTTTGATCCCGTCCATGAAGAGTGGGG
CGAAAAAGACCAGCACGCCCACGACTGGTGCGCAGTTCCGTTGCCGAATTATGCCAAAGC
TTTATTACACTATCCAGAGGAAAATGATTTATACCATTGCGTGATCTACCTGGCGCCTGG
TGATTATCATCGCTTTCACTCGCCTACCGATTGGATTGTGCAGCATCGGCGACATTTTCC
TGGCGATTTATTGAGCGTCAATCCGAAACTTGCGTCCGTAGTGCCTAGCTTGTTCGTTCT
TAACGAGCGGGTCGCGCTGATGGGAAAGTGGAAACACGGATTCTTCTCCATGACTGCGGT
CGGCGCGACCAACGTCGGCTCCGTTGACATTTACGGGGATCTCACGTTGAAAACAAACAG
ACCAAAGCGTGTGTACGGTGCCTACTATGATGCAAAGTACGACGATGTGCCGGCCTTGAA
GGGAATAGGAATGGGAGAATTCAACCTTGGCTCGACAATCGTGTTGATATTTGAAGCGCC
CAAAGATTTCGAATATGCTGTGGAATCCAGTGACAAGATATGTTACGGTAAAGCGCTACA
AAAAGTTTA

InterProScan

Hamap	PSD_type1_euk (IPR033661) - T[82-462] 28.548
PANTHER	PS_Dcarbxylase (IPR003817) - T[146-461] 2.0E-110
TIGRFAM	PSD (IPR033177) - T[200-458] 7.3E-69
Pfam	PS_Dcarbxylase (IPR003817) - T[213-459] 7.0E-60

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PISD_HUMAN	48.78 %	308	4.57E-101