- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Clone 'csef049f17' >
- Clone 'cien194646' >
- Clone 'ma338d12' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g04587.01.t
Possible name(s)
SRP72
Gene model
Location
chrUn [30,161,650 / 30,163,696]
Amino acid sequence
Length: 681
>Boschl.CG.Botznik2013.chrUn.g04587.01.p
MFSELNKAIHVSDYKQVLKISNKIIHSKEGNKDEKAMQCKVVAFIYLNQFDEALKFIQSN
PEINKSLIFEKAYCQYRLLQINEAFETISDAEELDIRLMELKAQILYKLGSYEDALVLLK
KLVKDCADSSENERKANLLAVSASISLWDDKPSDIKLSLTSYEQMYNKACELLGRGEIGE
AEKMLTDSITKCREYFEQFPEVEEDEIDDELSPLQVQLAYCLQLRGLADEALKIYNQVLR
SRPSDVGLIAIASNNIITINKEQNVFDSKKKLKATLIPDIQRKLVSKQLGLIERNKALLY
MYSNQWDACRKLLKNLQKLDKNSEIPCMIQTAQLSREKNFEKAISHLEDFIENHSDPDLH
SIDLTHIKLTLVQFLYSQGHIDRACGVLDSIESLRHAPAIVSLLISLFEHKKSRESKAVK
VFNEAVVWHKKQKSADKIQKKLMWENAQYSIKHGRHEHAAEMLEKLRLLDRNNVKVLAQL
IFAYSQFNPTKAHQLSEDLPSLEEMSLSVDVSSLEKNATQLLAPRYVKRQAKQLAKKKGN
EEKEMASGDKAVKKKDVVSEVKADQPIKTDKKKRKKKKRLPKEYDPAIEPDPERWTPLRE
RSYYKGRRRDKKKGIGTGTQGTSGSAVTDNLDMSKHSSTASAPKPAASPQVNSPKPAPSG
ARPKSKQTARNRRKKGKGGAW
Nucleotide sequence
Length: 2,046
>Boschl.CG.Botznik2013.chrUn.g04587.01.t
TGTTCTCAGAACTGAACAAAGCCATCCATGTTTCCGATTACAAGCAAGTCTTGAAAATCA
GCAACAAAATCATCCACTCCAAAGAGGGAAATAAGGATGAAAAGGCGATGCAATGCAAAG
TGGTAGCTTTCATCTACTTGAACCAGTTCGACGAGGCTTTGAAATTCATCCAATCCAATC
CCGAAATTAATAAGAGTTTGATATTCGAAAAAGCGTACTGCCAGTATCGCTTGCTACAAA
TCAATGAGGCTTTTGAAACGATCAGCGATGCTGAAGAGCTTGATATCCGCTTAATGGAGT
TGAAGGCACAAATTCTGTATAAACTTGGTTCTTACGAAGATGCCCTTGTGCTGCTTAAAA
AGCTGGTCAAAGACTGCGCGGATTCGTCAGAAAATGAACGCAAAGCAAACCTTCTTGCCG
TGTCTGCCTCGATTTCTTTATGGGACGACAAACCGTCTGACATTAAGCTGTCTCTGACCT
CGTATGAGCAAATGTACAACAAGGCATGCGAACTTCTCGGCAGAGGAGAGATCGGCGAAG
CCGAGAAAATGCTGACGGATTCTATCACAAAGTGTCGCGAATATTTCGAGCAGTTTCCAG
AAGTGGAAGAGGATGAGATTGATGACGAATTATCTCCGTTACAAGTGCAGTTAGCTTACT
GTCTTCAACTTAGAGGTCTTGCGGATGAAGCTTTGAAAATATACAATCAGGTTCTCCGCT
CACGGCCTTCAGATGTAGGCCTGATCGCTATTGCGTCAAATAACATCATTACGATCAACA
AGGAACAGAATGTGTTCGATTCTAAGAAGAAGTTGAAAGCGACTTTAATTCCTGACATTC
AAAGGAAATTGGTGTCAAAACAACTTGGTTTGATCGAAAGAAATAAAGCTCTTTTGTACA
TGTACTCGAACCAGTGGGACGCGTGCCGAAAGCTGCTGAAAAATCTTCAAAAATTGGACA
AAAACAGCGAGATTCCGTGCATGATCCAAACGGCGCAGCTGAGCAGAGAAAAGAATTTTG
AGAAAGCAATATCTCATTTGGAGGATTTCATTGAAAATCATAGCGACCCTGACTTACATT
CCATCGATTTAACTCACATCAAGTTGACTTTAGTCCAATTCTTGTACAGCCAAGGACATA
TCGACCGAGCCTGCGGTGTCCTCGACAGCATTGAATCTCTACGTCACGCCCCTGCGATTG
TATCTCTCTTAATTTCGCTTTTCGAGCACAAAAAAAGCAGAGAATCGAAAGCAGTTAAAG
TCTTCAACGAAGCCGTTGTTTGGCATAAAAAGCAAAAAAGCGCGGACAAAATCCAGAAGA
AATTAATGTGGGAAAACGCGCAGTACAGCATCAAACACGGTCGTCACGAACACGCTGCTG
AAATGCTTGAAAAGTTACGGTTACTGGATCGCAACAACGTTAAAGTTTTGGCCCAGCTGA
TATTCGCTTACTCTCAATTCAATCCGACTAAAGCTCACCAGCTCAGCGAAGATTTACCGT
CTCTCGAGGAAATGTCGCTGTCTGTAGATGTGAGCAGTTTGGAGAAGAACGCGACACAAT
TGTTGGCGCCTAGATACGTGAAAAGACAGGCTAAGCAACTGGCCAAAAAGAAAGGGAATG
AAGAAAAAGAAATGGCTTCTGGAGATAAAGCTGTGAAAAAGAAGGACGTAGTTTCCGAGG
TAAAAGCGGACCAACCGATCAAGACCGACAAGAAAAAACGCAAGAAAAAGAAGCGTTTAC
CAAAGGAATACGACCCAGCTATCGAACCAGACCCTGAAAGATGGACCCCGCTTCGTGAGA
GGTCTTACTACAAAGGCAGGAGGCGCGACAAGAAAAAAGGCATCGGTACCGGCACGCAAG
GAACGTCTGGATCAGCAGTCACCGATAATTTAGATATGTCGAAACACAGCAGTACCGCAA
GCGCCCCGAAGCCTGCGGCTTCCCCGCAGGTTAATTCGCCGAAGCCTGCCCCGTCCGGGG
CTAGGCCTAAATCGAAACAGACGGCCAGGAATCGCAGGAAAAAGGGTAAAGGTGGGGCTT
GGTGAG
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-155] 1.2E-41 - T[156-274] 1.5E-5 - T[286-504] 1.5E-10 |
| PIRSF |
SRP72 (IPR026270) - T[1-680] 4.5E-175 |
| PANTHER |
SRP72 (IPR026270) - T[2-677] 2.3E-183 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[12-124] 9.93E-8 - T[162-247] 6.04E-13 - T[292-360] 6.04E-13 - T[422-475] 6.04E-13 |
| Pfam |
SRP_TPR-like (IPR031545) - T[13-143] 5.8E-22 |
| SMART |
TPR_repeat (IPR019734) - T[96-129] 350.0 - T[162-195] 53.0 - T[212-245] 10.0 - T[290-323] 99.0 |
| Pfam |
TPR_repeat (IPR019734) - T[216-244] 0.082 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[552-606] 3.9E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 40.516 % | 431 | 1.63E-142 |