- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g03889.01.t
Possible name(s)
POU4F1; POU4F2; POU4F3
Gene model
Location
chrUn [25,191,516 / 25,192,681]
Amino acid sequence
Length: 158
>Boschl.CG.Botznik2013.chrUn.g03889.01.p
MYNKQHASFSVGCSSTSITHADIPPGDLTAEPRELEAFAERFESLTLSHNNMVALKPILT
TWLELAEEEYRRKMEQSGLAEKKRKRTSIAAPEKRSLEAYFLVQPRPSSEKIAAIAEKLD
LKKNVVRVWFCNQRQKQKRMKFSAFNGVIITTQLPMWS
Nucleotide sequence
Length: 477
>Boschl.CG.Botznik2013.chrUn.g03889.01.t
TGTATAACAAGCAACACGCGTCGTTTTCAGTCGGCTGTTCGTCAACATCGATAACACACG
CAGACATTCCGCCCGGCGACTTAACCGCGGAGCCCAGAGAATTGGAAGCGTTCGCGGAAA
GGTTTGAGTCGTTAACACTAAGCCACAATAATATGGTCGCTCTAAAGCCAATTCTAACGA
CATGGTTGGAACTGGCAGAAGAGGAATATCGAAGGAAAATGGAACAATCTGGATTGGCCG
AGAAAAAGCGTAAAAGAACATCAATTGCAGCGCCAGAAAAGCGATCTCTTGAAGCGTACT
TTTTGGTACAGGCGAGACCGTCTTCTGAGAAAATTGCGGCCATCGCGGAAAAGCTGGACT
TGAAGAAAAACGTCGTCAGAGTATGGTTTTGTAACCAAAGGCAAAAGCAAAAGCGGATGA
AATTCTCTGCGTTCAACGGGGTTATTATTACAACACAGTTGCCAATGTGGTCTTAGA
| ProSiteProfiles |
POU_dom (IPR000327) - T[1-67] 10.956 |
| SMART |
POU_dom (IPR000327) - T[27-67] 0.0012 |
| PRINTS |
POU (IPR013847) - T[35-48] 2.0E-19 - T[51-66] 2.0E-19 - T[81-101] 2.0E-19 - T[116-131] 2.0E-19 |
| Pfam |
POU_dom (IPR000327) - T[40-67] 1.2E-7 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[77-140] 3.76E-16 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[80-140] 16.779 |
| SMART |
Homeobox_dom (IPR001356) - T[82-144] 3.0E-17 |
| Pfam |
Homeobox_dom (IPR001356) - T[83-139] 2.8E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[83-141] 2.41656E-14 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[115-138] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO4F2_HUMAN | 62.025 % | 182 | 6.03E-57 |
| PO4F3_HUMAN | 54.645 % | 179 | 1.35E-56 |
| PO4F1_HUMAN | 63.291 % | 179 | 2.51E-55 |