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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g03541.01.t

Possible name(s)

BNC1; BNC2

Location

chrUn [22,848,478 / 22,851,629]

Sequences

Amino acid sequence

Length: 734

>Boschl.CG.Botznik2013.chrUn.g03541.01.p
MVTPALSGSVTEEEISFHPDRSNSSSPEGSEPDRPSQLLWHKRDEDSAKNSDAGSASTSE
KPPDETLILNNGVDASRLSRETGSGRSDFFEQSQQIHCRRRKRKSQNPSRVADSDDETAS
DESPREDCHFYKEESEALNTESSDGGERNPNDAKDGRNPTYELTHSCDIRESVSPEETDE
ISSRFEMEKDERKRTRIGQDTAAGKRIRHHSCADSDPNLVIETLNLKDIDSSKYQAQPLS
EGSATPHNKSSKHDYDASNRRDKSGEFAMPPVPFRSNVKSPLSPSFASNSSIYSSSPDDK
IKAPFFPHHVMAGLSKSPPAMSHSFLGTDLCGGGAAIGANPLLHSPTLPSSAGHLYSSID
YTSLPGGEIRSGIWIPTRSRNCHICGKEFKNVYSVKLHIKNVHLKEMLKCTVSGCNATFP
SKRSRDRHSANSNLHSKLRLRGIYADTRICAQTADMTEMLRESFLPSLLSIPQIEKSPRP
PDKVNSDAATKKNRISSDYNPERTQKHENSDTSMPRRVNHDHVVVSDRDLENVDEREYLS
KQSPHKDTRDRSPRKSGERDGQNRQQLGKDAKEAGEMKDQERLYYKFLAEAFNGIRERHG
NDTHRSDKLNGLANMSAVARMPFFSPTFQMNAGTPPKIPFPRTYSTFSSREELPYHNSSA
GNQGSKSPIHGTPAQSDARECDKHETPHRSRNNPNKDELQKMTDHRAHAKVVKNDKQLSQ
NDGSSDKSRGVERA

Nucleotide sequence

Length: 2,205

>Boschl.CG.Botznik2013.chrUn.g03541.01.t
CATGGTAACTCCCGCTCTCAGCGGATCTGTAACGGAAGAGGAGATTTCTTTTCACCCGGA
TCGGAGCAACAGCTCATCGCCGGAAGGCTCGGAGCCCGACCGGCCTTCGCAGTTACTGTG
GCATAAGCGCGACGAAGACAGTGCCAAGAATAGCGATGCGGGATCGGCATCTACGTCGGA
AAAACCTCCCGATGAGACTTTGATTTTGAATAATGGAGTAGATGCGTCAAGATTATCGAG
AGAGACAGGGTCAGGTCGGAGCGATTTCTTTGAACAAAGCCAGCAGATACACTGTCGCAG
ACGTAAACGAAAGTCGCAAAATCCTTCCCGTGTCGCGGATAGTGATGACGAAACTGCGTC
AGATGAATCTCCTCGTGAAGATTGTCACTTTTATAAAGAGGAATCGGAGGCGCTCAATAC
TGAATCAAGTGACGGAGGTGAACGCAATCCCAATGATGCAAAGGACGGTCGCAATCCGAC
GTATGAACTTACGCACTCTTGCGATATCCGGGAAAGTGTTTCGCCCGAAGAAACTGACGA
AATATCATCGAGATTTGAGATGGAAAAGGATGAGAGGAAGCGTACGCGTATCGGGCAAGA
CACCGCAGCAGGGAAAAGAATACGACATCATTCTTGCGCGGACAGTGATCCGAATTTAGT
TATCGAGACGTTAAACTTGAAAGACATTGATTCATCAAAATATCAGGCGCAGCCGTTATC
AGAAGGAAGTGCTACTCCCCACAACAAATCAAGCAAGCACGACTACGATGCGTCAAATAG
GCGCGATAAAAGTGGCGAATTCGCGATGCCGCCTGTCCCTTTCAGATCCAACGTAAAAAG
TCCCTTATCGCCGTCTTTTGCTTCCAACTCTTCAATATATTCATCGTCTCCAGATGACAA
AATAAAGGCCCCGTTCTTTCCACATCACGTGATGGCGGGTTTATCGAAATCGCCGCCGGC
AATGTCTCACAGTTTTCTGGGCACAGATTTGTGCGGGGGCGGCGCTGCGATTGGAGCTAA
TCCGCTGTTGCATTCGCCTACCCTGCCATCGTCGGCAGGTCATTTGTATTCGTCAATTGA
CTATACCTCCTTGCCGGGTGGCGAAATTCGAAGTGGAATATGGATCCCGACGCGATCAAG
AAACTGTCACATTTGCGGGAAGGAATTCAAAAACGTATACAGTGTCAAATTACACATCAA
GAACGTCCATTTAAAGGAAATGTTGAAGTGTACGGTGTCCGGGTGCAATGCTACTTTCCC
GTCCAAAAGAAGTCGGGATCGTCATAGCGCCAATTCCAATTTGCACAGCAAACTGCGTCT
GCGAGGAATTTATGCCGACACGAGGATTTGTGCCCAAACTGCAGACATGACGGAAATGTT
GCGGGAAAGCTTTCTACCTTCTCTATTATCAATACCTCAGATTGAGAAATCACCGCGACC
GCCAGACAAAGTCAACAGCGATGCGGCTACAAAGAAGAATCGGATTTCATCAGATTATAA
CCCCGAACGCACCCAAAAACATGAAAACTCTGATACGAGCATGCCACGACGGGTAAATCA
TGACCATGTGGTAGTGAGTGATAGAGACCTCGAAAACGTCGACGAACGCGAATATCTCAG
TAAACAGTCACCACATAAGGATACGCGAGACAGATCACCGCGAAAATCCGGCGAAAGAGA
CGGGCAAAATCGTCAACAACTTGGGAAAGACGCGAAAGAGGCTGGCGAAATGAAAGATCA
AGAGAGGCTTTATTACAAGTTCTTGGCAGAAGCATTCAACGGAATTCGGGAAAGGCACGG
AAACGACACGCATCGCTCTGATAAACTGAATGGGCTAGCAAATATGTCGGCAGTCGCACG
AATGCCGTTTTTCAGTCCGACATTTCAGATGAACGCGGGAACTCCGCCGAAGATTCCATT
TCCGCGGACATATTCAACTTTTTCTTCTCGAGAAGAGTTACCGTATCATAATTCGTCGGC
GGGCAATCAAGGAAGCAAGTCTCCTATTCACGGCACTCCTGCCCAGTCCGATGCGCGTGA
ATGTGACAAACACGAAACACCCCACCGCTCAAGAAACAATCCGAATAAAGACGAGCTTCA
AAAGATGACGGACCACCGAGCCCATGCCAAGGTGGTCAAGAATGACAAACAATTGTCGCA
AAATGACGGATCCAGCGACAAATCAAGAGGCGTTGAAAGAGCATG

InterProScan

ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[380-408] 9.681
SMART
Znf_C2H2_type (IPR013087) - T[380-403] 0.047 - T[408-435] 1.4
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[382-403] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BNC2_HUMAN 44.203 % 98.6 3.91E-21