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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g03540.01.t

Possible name(s)

BNC1; BNC2; SALL1

Gene model

Boschl.CG.Botznik2013.chrUn.g03540

Location

chrUn [22,847,229 / 22,848,435]

Sequences

Amino acid sequence

Length: 401

>Boschl.CG.Botznik2013.chrUn.g03540.01.p
MPLPLGVPGAEQTSNLLPGLMNLMGKYPFYNEAVANRNVEIARYLQPGNILFDYFHKHLA
NSALIPDVLGKRKQEDEFMSRSSEKVHDIDHRGLARSPKRRKLDNESSSTRPDAANDKNG
ILKPRLVEISSPTHQVATENEFVEQRRKRQNPDKNSVGRSYDVSYKSQREGSRYPKPAVS
EAVSQGIEMPFHPLFNRSMFPSSPPMPFGTASHLKALNPASQMTLQAPSPIMSSNPYLPS
LMGDQNTSFMNATLMAAALSRQKNALPFPPTSSALYNINPFASNFFAPKLQSPVMQGIER
QTVTSIASTEEMMRALDGVTEMDDPTLGMEGNTWKTGPVQCSICNRMYSNKGTLRVHFKS
VHLREMHRCTVPGCDMMFTSVRSRNRHSQNPNLHRTLPYHP

Nucleotide sequence

Length: 1,206

>Boschl.CG.Botznik2013.chrUn.g03540.01.t
AATGCCACTACCGCTTGGGGTTCCTGGCGCCGAGCAAACTTCAAATCTCTTGCCCGGACT
TATGAATTTGATGGGGAAATATCCATTTTACAACGAAGCCGTTGCCAATAGAAATGTCGA
AATTGCAAGATATCTGCAGCCGGGAAATATTCTTTTTGATTATTTCCACAAACATCTTGC
CAATTCTGCACTGATCCCCGATGTCTTGGGCAAAAGAAAGCAAGAGGATGAATTTATGAG
TAGATCCTCTGAGAAAGTGCATGATATTGACCATAGAGGCCTCGCGAGAAGTCCCAAGCG
AAGAAAATTGGATAACGAAAGTTCCTCAACCCGTCCGGATGCAGCAAATGACAAGAATGG
AATACTTAAACCAAGACTCGTCGAAATATCTAGTCCAACTCACCAGGTTGCAACTGAGAA
CGAATTCGTTGAGCAACGCCGGAAGAGGCAAAATCCAGACAAAAATTCAGTTGGAAGATC
ATATGATGTATCTTACAAGTCGCAACGGGAAGGATCAAGATATCCAAAACCAGCCGTGTC
CGAGGCTGTTTCTCAGGGGATCGAAATGCCATTCCACCCACTCTTCAATCGCTCGATGTT
TCCGTCTTCACCACCAATGCCATTTGGTACAGCTAGTCATTTGAAGGCATTAAACCCGGC
GAGTCAAATGACATTACAAGCTCCATCGCCAATCATGTCTTCTAATCCCTACCTTCCATC
TCTGATGGGCGATCAAAACACGAGCTTCATGAATGCCACCCTAATGGCAGCAGCATTATC
AAGGCAGAAAAATGCATTGCCTTTTCCCCCGACATCGTCCGCGCTGTACAATATAAATCC
CTTTGCTTCGAACTTTTTCGCGCCTAAATTACAAAGCCCGGTCATGCAAGGCATAGAGCG
ACAGACCGTGACTAGTATTGCGTCGACGGAAGAAATGATGCGTGCTCTTGATGGAGTGAC
GGAAATGGACGATCCTACGCTGGGAATGGAGGGGAACACCTGGAAAACTGGTCCAGTGCA
ATGTAGCATCTGTAACAGAATGTACAGCAACAAAGGTACCTTGAGGGTACATTTCAAATC
CGTCCATCTGCGCGAAATGCACCGCTGCACAGTACCCGGGTGTGATATGATGTTTACATC
TGTCCGAAGTCGCAACCGTCACAGCCAGAATCCTAACTTACATCGAACTCTGCCATACCA
TCCCTA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[336-366] 2.62E-5
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[339-367] 9.91
SMART
Znf_C2H2_type (IPR013087) - T[339-362] 0.0043 - T[367-394] 0.47
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[341-362] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BNC2_HUMAN 74.603 % 119 6.5E-29
BNC1_HUMAN 64.062 % 105 1.84E-24