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  1. Molecular Tool 'cieg33d12-MO (Hamada's MO)' > 
  2. Molecular Tool 'cicl60n11-MO (Hamada's MO)' > 
  3. Molecular Tool 'cieg096g06-MO (Hamada's MO)' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g03149.01.t

Possible name(s)

OPN1LW; OPN1MW2; OPN1MW3

Gene model

Boschl.CG.Botznik2013.chrUn.g03149

Location

chrUn [20,130,464 / 20,132,108]

Sequences

Amino acid sequence

Length: 130

>Boschl.CG.Botznik2013.chrUn.g03149.01.p
MINLTATTPMNFESDQDRLHNFYRSVEEVVRTPLNYIVINLTAADLIGAVCGNTLNVMAN
IASGFFLGKPMCVIEGATASVAGVAGLMSVAVMAFERYFVVCKPFGPVHFTDRHAYLGIC
VSDIPWNFNE

Nucleotide sequence

Length: 393

>Boschl.CG.Botznik2013.chrUn.g03149.01.t
GATGATAAATCTCACTGCCACAACACCAATGAATTTCGAGTCCGACCAAGATCGACTCCA
TAATTTCTATCGAAGTGTTGAAGAGGTAGTGAGAACTCCACTCAATTACATTGTCATCAA
CTTGACGGCGGCTGACCTCATTGGAGCAGTATGTGGAAACACCTTGAATGTCATGGCCAA
TATTGCAAGCGGATTTTTTCTCGGAAAACCCATGTGTGTGATTGAAGGAGCAACTGCGTC
TGTTGCAGGTGTTGCTGGTCTGATGTCAGTAGCGGTAATGGCTTTTGAGAGGTACTTCGT
GGTCTGCAAACCGTTCGGTCCCGTGCATTTTACCGACCGACATGCCTATTTGGGTATATG
CGTCAGTGATATTCCATGGAACTTCAATGAGTA

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[14-130] 11.364
Pfam
GPCR_Rhodpsn (IPR000276) - T[27-115] 1.3E-12
PRINTS
GPCR_Rhodpsn (IPR000276) - T[34-55] 8.7E-6 - T[79-101] 8.7E-6
ProSitePatterns
GPCR_Rhodpsn (IPR000276) - T[85-101] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OPSR_HUMAN 46.316 % 96.7 6.53E-25
OPSG3_HUMAN 47.368 % 95.9 1.35E-24
OPSG_HUMAN 47.368 % 95.9 1.35E-24