- EST 'BW407513' >
- Transcript 'Moocul.CG.ELv1_2.S72...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g02211.01.t
Possible name(s)
BTRC; FBXW11; TRAF7
Gene model
Location
chrUn [14,540,801 / 14,545,402]
Amino acid sequence
Length: 275
>Boschl.CG.Botznik2013.chrUn.g02211.01.p
MRQDTAIVTNELQQLNTKLNMGAGIGMFDPQQIFKCKGTFVGHGGPVWCLYVHGDLLFSG
SSDKNIKVWDTANNYKCQKTLEGHDGIVLAITAKGSNLYSGSADNKIKVWDINLLEEVNT
VEAHENAVCTLVCAGDYLFSGSLKNIKVWKMEGSNLSLYRELTGLNHWVRALVASQNYVF
SGSYQTVMVWQVKNFDQVATLTGHVGTIYALAVLSTPDQTKVFSASYDRSLRVWSMDNMI
CTQTLLRHQGSVTCLAVSRGRVFSGAVDSTVKVWQ
Nucleotide sequence
Length: 828
>Boschl.CG.Botznik2013.chrUn.g02211.01.t
TGCGTCAAGACACGGCCATCGTCACCAACGAGCTACAGCAGCTGAACACGAAACTCAACA
TGGGTGCTGGCATAGGAAGGTTTGACCCGCAGCAAATCTTCAAGTGCAAAGGAACATTCG
TGGGCCACGGCGGCCCGGTCTGGTGCCTTTACGTCCACGGGGACTTGCTGTTCAGTGGCT
CTTCGGACAAGAATATCAAGGTGTGGGACACAGCGAACAATTACAAATGTCAGAAGACTT
TGGAAGGCCACGACGGGATTGTCTTGGCCATCACGGCTAAAGGATCGAATCTGTACAGCG
GGTCCGCCGATAACAAAATCAAGGTTTGGGACATTAACTTGTTGGAAGAAGTGAATACAG
TGGAGGCCCACGAGAACGCGGTGTGCACTTTGGTCTGCGCGGGCGACTATCTCTTTAGTG
GGTCCCTCAAGAACATAAAGGTGTGGAAAATGGAAGGCTCAAATTTGAGTCTGTACCGGG
AACTGACAGGGCTGAACCACTGGGTCAGGGCGCTGGTCGCGTCTCAAAACTACGTCTTCA
GCGGCAGTTACCAGACAGTAATGGTTTGGCAAGTGAAAAATTTCGACCAAGTGGCCACCC
TGACCGGTCACGTGGGCACTATCTACGCCCTGGCCGTTCTCTCCACGCCGGACCAGACCA
AGGTTTTCAGCGCTTCCTACGACAGATCTCTGCGGGTTTGGAGCATGGACAATATGATCT
GTACTCAAACGCTACTGCGCCACCAAGGCAGCGTCACCTGTCTGGCTGTGTCGAGGGGTA
GAGTGTTCTCCGGGGCTGTAGACTCTACGGTCAAAGTCTGGCAGTGAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[20-182] 7.0E-36 - T[183-275] 6.6E-20 |
| SMART |
WD40_repeat (IPR001680) - T[33-70] 5.7E-8 - T[74-111] 2.2E-5 - T[114-150] 0.76 - T[155-191] 17.0 - T[194-235] 2.4E-4 - T[238-275] 1.0E-4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[34-275] 6.11E-57 |
| Pfam |
WD40_repeat (IPR001680) - T[35-70] 9.1E-7 - T[76-111] 3.8E-5 - T[197-235] 7.8E-5 - T[241-274] 0.0021 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[40-275] 38.52 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[40-70] 11.043 - T[81-120] 11.544 - T[201-244] 10.141 - T[245-275] 11.143 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[57-71] . - T[98-112] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[57-71] 2.9E-8 - T[98-112] 2.9E-8 - T[262-275] 2.9E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBW1A_HUMAN | 32.9 % | 111 | 1.29E-27 |
| FBW1B_HUMAN | 32.9 % | 112 | 3.42E-28 |
| TRAF7_HUMAN | 63.608 % | 405 | 1.74E-138 |