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TRANSCRIPT CARD

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  1. Region 'REG00000887' > 
  2. Transcript 'KH2012:KH.C7.568.v3....' > 
  3. Transcript 'KH2012:KH.L152.2.v1....' > 
  4. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g02058.01.t

Possible name(s)

PBX1; PBX2

Gene model

Boschl.CG.Botznik2013.chrUn.g02058

Location

chrUn [13,342,865 / 13,346,900]

Sequences

Amino acid sequence

Length: 199

>Boschl.CG.Botznik2013.chrUn.g02058.01.p
ACNEFTTHVMNLLREQSRTRPISNKEIQRMISIITKKFNQIQLQLKQSTCEAVMILRSRF
LDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELARKCSITVSQVSNWFGNKRIR
YKKNIGKFQEEANLYAAKTAQAAVSADMSGGRMFSPGSQGGPPGSPTGGPMHGSPNSSTP
TTPTSGHSKFQLIDAVRQN

Nucleotide sequence

Length: 600

>Boschl.CG.Botznik2013.chrUn.g02058.01.t
CGTGCAACGAATTCACGACCCATGTGATGAATCTGCTGCGCGAGCAGAGCAGGACCCGGC
CGATCTCGAACAAGGAGATCCAGCGGATGATCTCGATCATCACCAAGAAATTCAATCAGA
TTCAACTGCAGCTGAAGCAGAGCACGTGTGAGGCGGTCATGATTTTGAGGTCGCGATTCT
TGGACGCGAGGCGCAAGAGACGCAATTTCAGCAAGCAAGCCACGGAGGTATTGAATGAAT
ATTTCTACTCTCATCTGAGCAACCCGTATCCGAGCGAAGAAGCGAAGGAGGAATTGGCCA
GAAAGTGCAGTATCACAGTATCGCAGGTCTCGAACTGGTTCGGAAACAAGCGAATCCGTT
ACAAGAAGAACATCGGCAAATTCCAGGAAGAGGCCAATCTGTACGCAGCCAAAACCGCGC
AGGCGGCGGTCAGCGCAGGCATGTCCGGTGGTCGAATGTTCTCACCCGGCAGCCAAGGAG
GCCCGCCAGGGTCACCCACAGGCGGCCCCATGCACGGCTCGCCGAACAGCTCAACGCCAA
CAACTCCTACCTCCGGCCACAGTAAGTTTCAGTTAATCGATGCCGTACGCCAGAACTAGG

InterProScan

Pfam
PBX (IPR005542) - T[1-62] 4.2E-30
ProSiteProfiles
Homeobox_dom (IPR001356) - T[61-124] 17.313
SMART
Homeobox_dom (IPR001356) - T[63-128] 2.8E-17
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[63-131] 1.03E-20
CDD
Homeobox_dom (IPR001356) - T[64-124] 3.72408E-16
Pfam
Homeobox_dom (IPR001356) - T[64-123] 4.0E-19
ProSitePatterns
Homeobox_CS (IPR017970) - T[99-122] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PBX1_HUMAN 82.911 % 279 1.15E-93
PBX2_HUMAN 79.394 % 273 2.01E-91
PBX3_HUMAN 92.029 % 272 5.21E-91