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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g01047.01.t
Possible name(s)
DEPDC1; DEPDC1B; DEPDC7
Gene model
Location
chrUn [6,825,435 / 6,830,750]
Amino acid sequence
Length: 448
>Boschl.CG.Botznik2013.chrUn.g01047.01.p
MVSQQSLGDGECANTPNSKKLAPGPYRATKLWNTLVQKFREEMQCKRHRRHFKAYNQCFS
AAEATDFLHEVLKRNPNLGEDVTRRQTVQLLGKFLQSHVIEDVQGRWGSENFECDGKLYR
FPPIENTEDSVRRPLATIDENVSINQTINNNHKKDSAKRKRSQAYPFPDFQTDSEENESS
TTECEHLKRPLPPVSAIPKCRVISPKITEDDINDTWKKVILDRMREGLQLDSLCGVIVED
KIQGNFVRHNATRVGRSGVVQVEKEEDIPYWALSAMTCLANWPNSTDTGLPCYPGFERDI
FKAVCDYFKGLEPVSILQYGTAKKRTGNCKPVSIIQSQEPLLTYDCYELFTNAICLIQGE
TQQEAIKALRYALLILPPVNRRKLHLLTRLLAKMCKNSHLEKIGGRVDVRSLVLDTFSKV
VMSYNEEVYLDELLSMRLLSFLIDHHST
Nucleotide sequence
Length: 1,344
>Boschl.CG.Botznik2013.chrUn.g01047.01.t
AATGGTTTCTCAGCAAAGTCTCGGAGACGGAGAATGTGCGAATACTCCTAATTCCAAAAA
GCTTGCACCTGGACCGTACAGAGCGACCAAGCTGTGGAACACTTTGGTTCAAAAATTCCG
CGAGGAAATGCAATGCAAGAGACACCGAAGACATTTTAAAGCTTATAACCAGTGCTTTTC
TGCGGCAGAAGCAACTGATTTTTTACACGAAGTACTAAAGCGAAATCCGAATTTGGGCGA
GGATGTAACCAGACGACAGACAGTGCAACTGCTCGGCAAATTTCTTCAAAGTCACGTTAT
AGAAGACGTACAAGGTCGATGGGGCAGCGAAAATTTTGAATGTGATGGGAAGCTTTACAG
ATTTCCGCCCATCGAAAACACGGAGGACAGCGTCAGACGGCCGCTGGCGACAATCGACGA
GAACGTGTCAATAAATCAAACCATCAACAACAATCACAAGAAGGACAGCGCCAAACGGAA
GCGATCTCAAGCTTACCCGTTTCCCGATTTCCAAACTGATTCTGAAGAAAATGAATCGTC
AACTACCGAATGTGAACATTTGAAACGGCCCTTGCCCCCGGTGTCGGCCATTCCGAAGTG
TCGAGTGATATCTCCGAAAATTACAGAGGATGACATCAACGATACGTGGAAGAAGGTCAT
CCTGGACAGAATGAGGGAAGGATTGCAGCTCGACTCGCTGTGCGGCGTGATCGTGGAAGA
TAAAATCCAAGGTAATTTCGTCCGACACAACGCAACCCGCGTGGGGAGATCCGGGGTCGT
GCAAGTTGAAAAAGAGGAGGATATTCCGTACTGGGCACTGAGCGCGATGACGTGTTTGGC
GAACTGGCCCAACAGCACAGACACAGGGCTGCCGTGTTATCCTGGATTCGAGAGAGACAT
TTTCAAAGCCGTGTGCGACTACTTCAAGGGCCTCGAGCCCGTGTCGATTTTGCAGTACGG
AACTGCGAAAAAGCGCACCGGCAACTGCAAGCCTGTCTCGATAATCCAATCGCAGGAGCC
CTTGCTCACATACGACTGTTACGAGCTGTTCACGAACGCGATTTGCTTGATACAAGGCGA
AACGCAGCAGGAGGCCATCAAAGCCTTGCGCTACGCGTTGCTAATCCTGCCGCCGGTCAA
CAGAAGAAAGCTGCATTTGCTTACTAGGCTGTTGGCGAAAATGTGCAAGAATTCGCACCT
CGAGAAAATCGGAGGGCGAGTTGACGTGAGGTCGCTGGTGCTAGACACGTTCTCCAAAGT
CGTGATGTCGTACAACGAAGAAGTCTATCTGGACGAGCTGCTGTCCATGAGACTTTTGTC
TTTCCTGATCGATCACCATTCCAC
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[21-123] 1.9E-31 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[28-142] 3.97E-15 |
| SMART |
DEP_dom (IPR000591) - T[39-123] 2.4E-10 |
| Pfam |
DEP_dom (IPR000591) - T[43-121] 6.1E-13 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[260-448] 8.681 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[336-448] 1.3E-9 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[338-446] 1.96E-10 |
| Pfam |
RhoGAP_dom (IPR000198) - T[338-402] 1.3E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DEP1B_HUMAN | 36.036 % | 295 | 1.16E-94 |
| DEP1A_HUMAN | 36.176 % | 225 | 5.48E-66 |