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  1. Transcript 'Cisavi.CG.ENS81.R49....' > 
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g00394.02.t

Possible name(s)

RAB11FIP1; RAB11FIP2; RAB11FIP5

Gene model

Boschl.CG.Botznik2013.chrUn.g00394

Location

chrUn [2,575,038 / 2,582,198]

Sequences

Amino acid sequence

Length: 871

>Boschl.CG.Botznik2013.chrUn.g00394.02.p
MFSPTDIRVIVHRARNLLIKGKNTNDAYATMEFGGEKYATNVVEKSLSPSWHQECQYRLP
QGGVIHNAAVTVTVYNKHHGKLGLQIDDFIGIVKIPLGTLDVTSSKEYRRWYVLEHKNPK
KEKKQRGEVEVGIKFISKDRPNLLPDKRSPSNLRAIKGKLGNKWRRKSEDEDSGVGCDSN
SSSMKRGLSLADLHRTPSSASDSGPKKRLSIIEAGSAASARGLVKLSNKIGLGGHKTKAS
SVEVLHNPDLQKIPNSSNLRRSGSSGRPDSGNNSLSASVENVDQVESKPNEAANDMEQLH
ASHNDNFSNSKPQYSPDEKRKPSPLSIVYKPKSYYRLDVKELCKVSPIPEDPTVTFQHMS
KDELLTLCVKQHRVLASKNEQIKYVCRCAQNLVGSWMILWMVVRPLSLRHNAKRMFSPTD
IRVIVHRARNLLIKGKNTNDAYATMEFGGEKYATNVVEKSLSPSWHQECQYRLPQGGVIH
NAAVTVTVYNKHHGKLGLQIDDFIGIVKIPLGTLDVTSSKEYRRWYVLEHKNPKKEKKQR
GEVEVGIKFISKDRPNLLPDKRSPSNLRAIKGKLGNKWRRKSEDEDSGVGCDSNSSSMKR
GLSLADLHRTPSSASDSGPKKRLSIIEAGSAASARGLVKLSNKIGLGGHKTKASSVEVLH
NPDLQKIPNSSNLRRSGSSGSFLTAKKQHVRNRSMPDTSLLTLTERGSPRNSICINGPHV
YVSGPDSGNNSLSASVENVDQVESKPNEAANDMEQLHASHNDNFSNSKPQYSPDEKRKPS
PLSIVYKPKSYYRLDVKELCKVSPIPEDPTVTFQHMSKDELLTLCVKQHRVLASKNEQIK
YVCRCAQNLVGSWMILWMVVRPLSLRHNAKR

Nucleotide sequence

Length: 1,374

>Boschl.CG.Botznik2013.chrUn.g00394.02.t
TATGTTTAGTCCCACTGATATCCGAGTGATTGTGCATCGGGCCAGAAATCTTCTAATAAA
AGGCAAAAACACAAATGATGCATATGCCACGATGGAGTTTGGCGGCGAAAAATACGCAAC
GAATGTGGTGGAAAAGTCCTTGTCGCCGTCATGGCATCAAGAATGCCAGTATCGACTTCC
ACAAGGCGGAGTCATACACAATGCTGCTGTAACCGTCACTGTTTATAATAAACATCATGG
AAAACTTGGCCTTCAAATTGATGATTTCATAGGAATTGTTAAAATACCTCTTGGCACTTT
GGATGTTACCTCAAGTAAAGAATATAGAAGGTGGTATGTTTTGGAACATAAGAACCCTAA
GAAAGAAAAGAAGCAACGTGGTGAAGTCGAAGTTGGCATCAAGTTTATTTCTAAAGACAG
GCCTAATTTACTACCCGACAAAAGAAGCCCTAGCAACTTGCGGGCCATCAAAGGCAAACT
AGGAAACAAATGGAGGAGAAAATCTGAAGATGAAGACTCTGGCGTAGGTTGTGACAGCAA
CAGTTCCTCAATGAAGCGTGGTCTCTCATTGGCAGATCTTCACAGGACACCGTCGAGTGC
CAGTGACAGCGGACCTAAGAAACGATTATCTATTATTGAAGCAGGGTCAGCGGCTTCTGC
AAGAGGATTGGTGAGGCTGTCCAATAAGATTGGTCTCGGCGGCCACAAAACAAAAGCGTC
AAGCGTGGAAGTTTTGCACAATCCGGACCTTCAAAAAATTCCAAACTCTTCAAATTTGCG
AAGATCTGGTTCTAGCGGAGGTTTTCTTACTGCCAAAAAGCAACATGTGAGGAATAGATC
CATGCCAGACACTTCACTGCTGACACTGACCGAACGTGGCTCACCGAGAAACTCCATCTG
CATTAATGGCCCCCATGTTTATGTGTCAGGGCCTGATTCAGGCAATAACAGTTTGTCGGC
CTCTGTTGAGAATGTGGATCAAGTCGAATCGAAGCCAAATGAAGCAGCGAACGACATGGA
ACAGCTACATGCATCGCGCAACGATAACTTTTCAAACTCTAAGCCTCAATATTCCCCGGA
TGAAAAAAGGAAGCCATCGCCCTTATCAATTGTATACAAGCCGAAGAGCTATTACAGGCT
CGACGTGAAAGAACTATGCAAGGTGTCTCCCATTCCGGAAGATCCGACCGTCACATTCCA
GCACATGAGCAAAGATGAATTATTGACACTGTGTGTCAAGCAGCATCGCGTGTTGGCGAG
CAAGAACGAGCAGATAAAGTATGTATGCCGTTGCGCGCAGAATTTAGTGGGATCTTGGAT
GATATTGTGGATGGTTGTCAGACCTTTGAGTTTGCGACACAATGCAAAACGATA

InterProScan

ProSiteProfiles
C2_dom (IPR000008) - T[1-94] 11.418 - T[421-508] 10.945
Gene3D
C2_domain_sf (IPR035892) - T[5-139] 2.3E-23 - T[419-553] 2.3E-23
SMART
C2_dom (IPR000008) - T[6-111] 1.2E-12 - T[420-525] 1.2E-12
Pfam
C2_dom (IPR000008) - T[7-113] 1.2E-15 - T[421-527] 1.2E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFIP1_HUMAN 36.649 % 96.3 3.75E-20