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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g00177.01.t

Possible name(s)

CCR4; GHSR; SSTR5

Location

chrUn [1,139,094 / 1,140,129]

Sequences

Amino acid sequence

Length: 344

>Boschl.CG.Botznik2013.chrUn.g00177.01.p
MSLSTNNITILISVTKTPKASDEFLRLSGVEYATIWTVFGTLTTVGVIGNSLMILTLRRM
KMTVFHIIVKGLCFSDILSACNSPLFVLLGMEMAINTPYVVCYLPTVLNLTTSVVTVYLV
LLLSVVRFRSVVFALTSEGEMTTKRCTLIVLSIWIMASVISIPHAFVFDISESKESCRCI
PRVGIDNALKYLCASALTIGIFIPMLLVVGFCVAIMLFLICRKPLPVAPSSSSKRKQQQA
LKQLAAIVSCFLIGYTADYGTTIYIISQHPDLDEQSLLEIGLSAHGILRFAECMNPLLYY
LGSNEIRKESQRMWNDAKIKFASTGEDYSNSNAVPTVSTQFNMA

Nucleotide sequence

Length: 1,035

>Boschl.CG.Botznik2013.chrUn.g00177.01.t
TATGTCGTTATCCACGAATAATATCACAATATTAATATCAGTAACGAAAACACCAAAGGC
TTCTGATGAATTTCTAAGATTAAGTGGAGTGGAATACGCGACAATTTGGACCGTATTTGG
AACATTGACCACGGTAGGCGTGATCGGGAATTCTCTGATGATATTGACGTTGCGTCGAAT
GAAAATGACCGTGTTTCATATCATCGTTAAGGGACTATGCTTTTCAGACATACTCTCGGC
CTGCAACAGTCCACTGTTTGTGCTGCTTGGAATGGAAATGGCAATAAACACTCCTTACGT
CGTCTGTTACCTACCCACGGTTCTTAATCTTACAACATCAGTCGTCACGGTTTATCTGGT
ACTGCTTCTGAGTGTTGTGAGATTTCGCAGCGTCGTTTTCGCGTTAACTTCTGAAGGCGA
AATGACTACTAAAAGGTGCACCTTGATTGTTCTTTCGATCTGGATTATGGCATCGGTGAT
ATCGATCCCACATGCGTTCGTATTTGATATTTCGGAAAGCAAAGAATCCTGCAGGTGCAT
CCCGCGGGTGGGTATCGATAATGCATTGAAATATTTGTGCGCCTCTGCCCTAACTATCGG
AATTTTCATACCAATGCTTCTGGTTGTCGGATTCTGCGTGGCCATCATGCTGTTCCTAAT
CTGCAGAAAGCCACTACCAGTGGCACCCTCTTCCTCTTCGAAGAGAAAACAGCAACAGGC
CCTCAAACAGCTCGCCGCCATTGTCAGCTGCTTTTTGATAGGATACACAGCGGATTACGG
CACGACGATATATATCATTTCTCAACACCCCGATCTCGATGAACAGAGCTTGCTCGAAAT
CGGATTGTCAGCTCATGGAATACTACGCTTCGCGGAGTGCATGAATCCGCTTCTCTACTA
CTTGGGATCGAACGAAATCCGGAAGGAGTCGCAACGTATGTGGAACGATGCTAAAATCAA
ATTCGCCTCTACCGGAGAGGACTACAGCAACAGCAATGCAGTTCCGACAGTGTCTACTCA
ATTTAATATGGCATA

InterProScan

PRINTS
GPCR_Rhodpsn (IPR000276) - T[34-58] 4.1E-12 - T[65-86] 4.1E-12 - T[109-131] 4.1E-12 - T[145-166] 4.1E-12 - T[193-216] 4.1E-12 - T[281-307] 4.1E-12
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[49-299] 21.655
Pfam
GPCR_Rhodpsn (IPR000276) - T[52-299] 8.0E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value