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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g00051.01.t

Possible name(s)

AC099850.2; SMG8

Gene model

Boschl.CG.Botznik2013.chrUn.g00051

Location

chrUn [238,318 / 239,779]

Sequences

Amino acid sequence

Length: 486

>Boschl.CG.Botznik2013.chrUn.g00051.01.p
MRDDPFDLKEGNYEFYVQLDKKAHIQPLEVYPFPVYHPGEESQGNVDMCYNTDGTASFSS
QVIGTDQQDYRVTYSGLIQSSSIPTQDYECHAKEGRKAPEKARSLEHSENVAEATAEEFD
NAVSTQDSYDGKDNADVSSQEISQGKPNVASVKSPMKSPKRDFVEAANADLKKITIKEPI
KSHVATSLNFAFSFGGQSEGSGRMQSPVDHDSQRESTADPITRNFAHIKEEKVNYVDGMI
HSNCKKGALPLYPSWSLARVGTYSTYSAMRGLESPGFLPGTNFLIPWDIVVDKPREDMQQ
WPSPGEAPPGMGKKIIPQIKEQKTLLGRRNKDDSTARAFIGYEYETLRGQRFICSAPDKP
VKVTSSGLVKESCHKLLENDMPLYSPSPASGRGGKTLIGQLMRVYVVIPPEPSIEVVINP
QVVPGPSPTPTFTTGVPDILLSNDSVWVLRFPYVYYSDLGPHYIPKDGAILQMCKVLKGL
VKLNSK

Nucleotide sequence

Length: 1,461

>Boschl.CG.Botznik2013.chrUn.g00051.01.t
TGAGGGACGATCCCTTCGACTTGAAAGAAGGAAACTACGAATTTTACGTGCAATTGGACA
AAAAAGCCCATATTCAGCCGTTGGAGGTTTATCCTTTCCCGGTGTATCACCCAGGCGAAG
AATCTCAAGGGAATGTCGACATGTGTTACAACACGGATGGGACTGCGTCCTTCTCGTCGC
AGGTCATCGGTACCGATCAGCAAGACTATCGAGTCACCTATTCGGGTTTGATTCAATCTA
GCAGCATACCGACTCAGGATTACGAATGCCACGCGAAAGAGGGTAGGAAAGCGCCTGAGA
AAGCACGTTCCTTGGAGCATTCTGAAAACGTTGCGGAAGCAACTGCTGAAGAGTTTGATA
ACGCCGTCTCGACTCAGGACAGTTATGATGGAAAGGACAATGCCGATGTGAGCAGTCAGG
AGATATCCCAAGGCAAACCTAATGTTGCCTCTGTCAAGTCCCCAATGAAATCCCCAAAAC
GTGACTTTGTTGAAGCCGCCAACGCGGACTTGAAGAAGATTACGATCAAAGAGCCGATCA
AGAGTCATGTTGCCACAAGCTTGAATTTCGCGTTCAGTTTCGGCGGTCAGTCGGAAGGCA
GCGGCCGCATGCAGAGTCCAGTGGATCACGATAGCCAGAGAGAATCCACGGCGGACCCAA
TAACTCGTAATTTTGCTCACATCAAAGAAGAGAAAGTCAATTATGTTGACGGTATGATTC
ATAGTAACTGTAAAAAAGGCGCTCTGCCGTTGTACCCTTCGTGGAGTTTGGCGAGAGTGG
GGACTTATTCGACCTATTCTGCCATGCGAGGTTTGGAATCGCCTGGATTCCTACCCGGTA
CGAATTTTCTTATCCCTTGGGACATAGTTGTGGACAAGCCGCGTGAGGATATGCAACAAT
GGCCGTCTCCGGGCGAGGCACCACCTGGTATGGGTAAAAAGATCATACCGCAAATAAAAG
AGCAAAAGACGCTGCTCGGACGAAGAAACAAAGACGACAGCACCGCCAGGGCTTTTATCG
GTTATGAATACGAGACGTTGCGTGGTCAGAGATTTATATGTTCTGCTCCGGATAAGCCTG
TTAAAGTAACAAGCAGTGGGTTGGTAAAGGAATCTTGTCATAAACTGCTGGAGAACGATA
TGCCTCTCTACTCGCCCAGTCCAGCATCGGGCCGAGGTGGCAAGACGCTCATTGGTCAGC
TGATGCGGGTATACGTAGTAATCCCTCCTGAACCGTCAATTGAAGTTGTTATCAACCCGC
AGGTAGTCCCAGGGCCATCGCCTACCCCCACTTTCACAACGGGTGTGCCTGATATACTGC
TTTCCAATGATTCGGTATGGGTGTTGCGCTTCCCGTATGTGTATTACAGCGATCTCGGTC
CGCATTATATTCCGAAGGACGGCGCCATTCTCCAAATGTGTAAGGTTCTCAAAGGCCTCG
TGAAACTGAATTCAAAATGAT

InterProScan

Pfam
Smg8/Smg9 (IPR019354) - T[2-480] 7.1E-90
PANTHER
SMG8 (IPR028802) - T[2-486] 6.2E-80

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMG8_HUMAN 45.455 % 233 1.5E-67