Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr9.g57728.01.t

Possible name(s)

CNNM1; CNNM2; CNNM4

Gene model

Boschl.CG.Botznik2013.chr9.g57728

Location

chr9 [7,889,246 / 7,890,494]

Sequences

Amino acid sequence

Length: 415

>Boschl.CG.Botznik2013.chr9.g57728.01.p
MDEEGPMNVTCLFEGEQIICNGTVYVKKEDPLTYTDEWFWIYLGIYVFLVLVAGLVSGLT
MGLLSLDMMSLNVLATGGKPREQKYAKKIVPLIKRHHLLLVTLLLTNAVAVESMPLFLDR
ISNPITAIIVSVTAVLIFGEVVPQAICTRYGLAIGAHLSFLVKFLMLITLPISYPMSKLL
DCILGTEHGTFFRRAELSVLVDLHQQTDDENEEPLSKDEAMIIKGALSMRDKKVQDICTP
IDKVYSLDIAGVMDEQTMEDILNSGHSRVPVYEGDKTNFLGVLLVKKLIKLDPEECIPIQ
TIFDSEGRDLPAIQEDVQLFDLLNQFQNGRSHMCKVIDNSGNKTGIITLEDVIEELIQEE
ILDETDLDVMKRLQIAKVKSARRKLLSARDGSYSLSPQHHHTDAASDSDTQPLLS

Nucleotide sequence

Length: 1,248

>Boschl.CG.Botznik2013.chr9.g57728.01.t
TGGACGAAGAGGGACCAATGAACGTGACCTGCTTGTTTGAAGGGGAACAGATAATATGCA
ATGGTACTGTGTATGTGAAGAAAGAAGATCCTCTAACCTACACCGACGAATGGTTTTGGA
TATACCTAGGAATTTACGTATTTTTAGTATTAGTGGCAGGGCTTGTCAGTGGTTTGACGA
TGGGACTCTTATCGCTGGACATGATGAGTTTGAACGTATTAGCAACGGGTGGAAAGCCCC
GCGAGCAGAAATACGCCAAGAAAATAGTCCCTCTAATCAAGAGACATCATCTGTTATTGG
TTACGTTGTTGTTAACTAACGCTGTAGCGGTTGAGAGCATGCCGCTTTTTCTGGACCGTA
TATCAAACCCAATCACTGCAATCATTGTATCTGTTACGGCGGTGCTAATTTTCGGCGAAG
TCGTCCCACAAGCTATATGCACTAGGTATGGGCTTGCTATTGGTGCGCATTTATCGTTCT
TGGTAAAATTTTTGATGTTAATAACATTACCAATCTCATACCCGATGTCTAAATTACTGG
ATTGTATCCTGGGTACAGAACACGGCACGTTCTTTCGTCGTGCTGAATTAAGTGTGCTGG
TTGATTTGCATCAGCAAACTGATGATGAAAATGAAGAACCGTTATCAAAAGATGAAGCTA
TGATTATCAAAGGCGCTTTGTCCATGCGTGATAAGAAGGTGCAAGATATATGCACTCCGA
TTGATAAGGTGTATTCGTTAGATATTGCTGGCGTTATGGACGAACAAACGATGGAAGATA
TACTCAATTCTGGACATTCAAGAGTCCCGGTTTACGAAGGAGACAAGACCAATTTTCTAG
GTGTTTTATTAGTGAAGAAGTTGATCAAACTTGATCCTGAAGAATGCATTCCAATCCAAA
CTATATTTGACAGCGAAGGTCGCGACCTACCCGCAATACAAGAAGATGTCCAACTTTTTG
ATCTATTAAATCAATTCCAAAATGGACGGAGTCACATGTGTAAAGTTATTGATAACTCCG
GCAACAAAACCGGGATCATAACTTTAGAAGATGTGATCGAAGAGCTGATCCAGGAAGAGA
TTTTGGACGAAACTGATTTGGATGTAATGAAAAGATTGCAGATAGCCAAAGTCAAATCTG
CTAGGAGGAAGTTATTGTCCGCGCGTGATGGAAGCTATTCTTTAAGTCCACAGCATCACC
ATACTGATGCAGCCTCTGACTCAGATACACAACCTTTGCTATCTTAGT

InterProScan

Pfam	DUF21 (IPR002550) - T[45-211] 1.2E-33
ProSiteProfiles	CBS_dom (IPR000644) - T[238-299] 7.31 - T[306-364] 9.764
Pfam	CBS_dom (IPR000644) - T[309-356] 0.0028

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNNM2_HUMAN	40.111 %	273	8.17E-84
CNNM4_HUMAN	35.753 %	243	2.54E-73
CNNM1_HUMAN	34.066 %	167	4.07E-45