- Transcript 'KH2012:KH.C1.706.v1....' >
- Transcript 'KH2012:KH.L116.59.v1...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'Moocci.CG.ELv1_2.S33...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g55774.01.t
Possible name(s)
GJA8; GJC1; GJD2
Gene model
Location
chr9 [5,233,777 / 5,239,125]
Amino acid sequence
Length: 345
>Boschl.CG.Botznik2013.chr9.g55774.01.p
MAWHILEKLIEQVAQHSTLVGKFWTTFFFVLRFLIVVSIADDVFEDEQEEFVCNTLTPGC
ENVCFNEFSPISLLRLWALQVLGVAIPSVIFIVYTAHKMDKIGEAKKAKEKEEDRKKKLA
EAKKIQSWRYLSGSDPPEYSRINVVKGEIKSVEDNKGKKETDDKKDNKEKDSGDDKPLIV
ATKLKDDNPPRLLLAYVFQVAFRLFLEIAFIIVQLRIYVFRFYIPELFQCSRWPCPNTVD
CFVSRPMEKTVLLWVMFGTGVLMIALGVLELYHIGIKTMYKAWTKRHQDITKEYKVASNS
APQFGRRDGYNRYKGGYPQAVGIRVGYARSSISGGDGGIQMDEFI
Nucleotide sequence
Length: 1,038
>Boschl.CG.Botznik2013.chr9.g55774.01.t
TATGGCTTGGCATATATTAGAAAAATTGATAGAACAAGTAGCGCAACATTCAACTTTGGT
AGGGAAATTTTGGACGACTTTCTTTTTTGTGTTGCGATTTTTGATCGTAGTCTCCATCGC
CGACGATGTCTTCGAAGACGAACAAGAGGAATTCGTTTGCAATACTTTGACGCCGGGCTG
CGAGAACGTCTGCTTCAATGAATTCAGTCCGATATCGTTATTGCGATTGTGGGCTCTTCA
GGTCCTTGGAGTCGCGATTCCGAGCGTAATATTTATTGTCTACACCGCCCATAAGATGGA
CAAAATTGGTGAAGCAAAGAAGGCCAAAGAAAAAGAGGAAGACCGGAAAAAAAAGCTTGC
CGAAGCGAAGAAAATTCAAAGTTGGAGATATTTGTCCGGATCGGATCCTCCCGAGTACAG
TCGCATCAACGTGGTAAAAGGGGAAATAAAAAGTGTTGAGGATAACAAGGGAAAGAAAGA
AACTGATGATAAGAAAGACAACAAAGAAAAGGATAGTGGCGACGATAAACCCTTGATTGT
AGCCACGAAGCTGAAAGATGACAACCCGCCCCGCTTGCTGTTGGCATATGTGTTCCAGGT
TGCTTTTCGACTGTTCTTGGAGATTGCATTCATCATTGTTCAGCTTCGCATTTACGTCTT
CAGATTTTATATCCCGGAACTCTTTCAGTGTTCCAGGTGGCCTTGTCCTAACACTGTAGA
CTGCTTCGTATCGAGGCCGATGGAGAAAACCGTATTGCTGTGGGTTATGTTTGGAACTGG
GGTGTTGATGATCGCTTTGGGGGTGCTGGAGTTATATCATATCGGCATAAAAACCATGTA
TAAAGCTTGGACCAAACGTCATCAAGATATCACCAAGGAATATAAAGTAGCTTCAAATAG
TGCTCCTCAATTTGGAAGACGGGATGGCTATAACAGATACAAGGGCGGATATCCCCAAGC
AGTAGGAATTAGAGTTGGATATGCGAGAAGTAGTATATCAGGCGGAGATGGTGGCATTCA
AATGGATGAGTTTATTTG
| PANTHER |
Connexin (IPR000500) - T[1-334] 6.2E-103 |
| Gene3D |
Connexin_N_sf (IPR038359) - T[1-135] 1.6E-43 - T[138-287] 7.0E-33 |
| Pfam |
Connexin_N (IPR013092) - T[3-275] 5.3E-82 |
| PRINTS |
Connexin (IPR000500) - T[20-44] 5.7E-45 - T[51-73] 5.7E-45 - T[76-96] 5.7E-45 - T[192-218] 5.7E-45 - T[230-250] 5.7E-45 - T[251-274] 5.7E-45 |
| SMART |
Connexin_N (IPR013092) - T[42-75] 9.2E-12 |
| SMART |
Connexin_CCC (IPR019570) - T[206-274] 1.5E-33 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[230-246] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 32.192 % | 187 | 2.89E-56 |
| CXA8_HUMAN | 34.276 % | 179 | 8.95E-53 |
| CXD2_HUMAN | 32.698 % | 169 | 7.2E-50 |