- EST 'BW497303' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g54962.01.t
Possible name(s)
NHLH1; NHLH2; TWIST2
Gene model
Location
chr9 [4,232,314 / 4,234,038]
Amino acid sequence
Length: 152
>Boschl.CG.Botznik2013.chr9.g54962.01.p
MRPAGRGLSTPGLTAIDGTNSHQRIESSKCRLDCSSSSSTPSTINNGIIKRKSPLAAQKE
KQRLRVFNDAMEDLQKVIPVRLPKGRKLQKKQTLQFAIKYIEFLQSCIDGKNDFNDRYRF
MWTEGTEQGEAINAIDMAARKSSDSVHGETVK
Nucleotide sequence
Length: 459
>Boschl.CG.Botznik2013.chr9.g54962.01.t
CATGCGGCCCGCGGGCCGTGGTTTGTCCACCCCTGGTCTGACGGCAATCGATGGTACTAA
CAGCCATCAACGAATCGAATCGAGCAAATGCAGACTCGATTGCTCTTCAAGCTCATCGAC
CCCAAGCACGATCAATAACGGCATTATAAAAAGAAAGAGTCCGTTGGCAGCCCAAAAAGA
GAAGCAGCGCCTCCGCGTTTTTAACGACGCGATGGAGGATCTGCAGAAAGTAATTCCGGT
TCGATTGCCCAAAGGGCGAAAACTACAGAAGAAACAAACTCTTCAGTTCGCTATCAAGTA
TATTGAATTTCTGCAAAGCTGCATCGACGGAAAAAACGACTTCAACGATCGCTACCGATT
CATGTGGACAGAGGGCACGGAACAAGGGGAGGCGATTAACGCTATTGACATGGCGGCTCG
TAAATCCTCTGACAGTGTACACGGGGAAACAGTGAAATA
| PANTHER |
Twist-related (IPR015789) - T[24-141] 8.7E-25 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[50-115] 6.7E-13 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[51-104] 11.242 |
| SMART |
bHLH_dom (IPR011598) - T[57-110] 4.1E-6 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[58-122] 2.36E-11 |
| Pfam |
bHLH_dom (IPR011598) - T[58-105] 1.4E-9 |
| CDD |
bHLH_dom (IPR011598) - T[60-105] 7.8114E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|
