- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g49271.01.t
Possible name(s)
CTRB1; CTRB2; CTRL
Gene model
Location
chr9 [9,706,459 / 9,720,169]
Amino acid sequence
Length: 651
>Boschl.CG.Botznik2013.chr9.g49271.01.p
MTCDFETDNCXWIQETQNDQFNWTRXRGPTXSKNTGPSHDHTMKNANGTYLYLEASKKQR
FDEAWLMSPIIDPKDSTPKCLSFWYHSFGENVGTIKVYSMPPNENGKYLGSSRWSNFKNQ
GNQWLFTEITINEALPYKVIIKGTIGLDYLGDIAIDDIRLRDEACDPCCWPSKFRCGNNY
CISNTKRCNGYDDCGDDSDESFCDSSAPGAKPVCGMPSATPVIPELTDDHESIRRDETVL
EEFDMPVEGRQSPKRPNNVWTGAMRIPLNQTLWLKYPTFVRGSSLKPDIRNFRGTGDINF
FDGFRAETINSARKRRSAGDFDDDEDDDEEMIDILKIHERHANAKNMKKEYLSSRDYEFL
EIKKHVLKSYGKSHKISASAWDIMRGNKRMTKSRRKRSVKKIIGGARASPRNYPWQVAYY
ITDSSANPTAHFFCGGTLIDRYWVLTAAHCPYLGDLHNVVLGDYDLFDDEGTEQEMLVDA
IFLRNNFQVTQDKNNDIALIKLRYPARQTPAVQLACILGNNQEPFAEGHPCVTTGWGRRV
ANKRGIERYLRQAEMPIIANSVCKATFWSSFEIHDSYICAGGSGENSCKGDSGGPLVCKR
QDDGLFYLAGITSWGDAYCKTTVPGVFTRVQSFNDWIHRIISRHEXCXNKS
Nucleotide sequence
Length: 1,956
>Boschl.CG.Botznik2013.chr9.g49271.01.t
NATGACTTGCGATTTTGAAACTGACAATTGCGGNTGGATACAGGAGACGCAAAATGATCA
GTTTAATTGGACAAGACNCAGAGGACCAACANCATCGAAGAATACCGGACCGAGCCATGA
TCACACTATGAAAGACGCCAACGGAACTTATCTATATCTTGAGGCGTCGAAAAAGCAACG
ATTTGATGAGGCATGGTTGATGAGTCCGATCATAGACCCTAAAGACTCTACGGCAAAGTG
CCTTTCGTTTTGGTACCACTCTTTCGGTGAAAACGTTGGTACAATCAAAGTATACAGCAT
GCCGCCGAATGAGAATGGAAAGTACCTTGGTTCGTCACGGTGGTCAAATTTTAAAAACCA
AGGAAATCAATGGCTTTTTACGGAAATCACTATCAACGAAGCACTGCCATATAAGGTCAT
CATAAAAGGCACTATAGGATTGGATTATTTGGGAGACATCGCCATCGACGACATACGATT
GAGGGACGAGGCCTGCGATCCTTGCTGCTGGCCATCCAAATTTAGATGCGGCAACAATTA
CTGCATATCGAATACGAAACGCTGTAATGGATATGATGATTGCGGGGACGACAGCGACGA
GTCATTTTGCGATTCCAGTGCACCTGGAGCAAAACCAGTGTGTGGTATGCCTTCTGCTAC
CCCAGTTATACCGGAACTGACGGACGATCACGAAAGTATTCGTCGCGACGAAACCGTTCT
TGAAGAATTTGACATGCCCGTGGAAGGAAGACAATCGCCTAAACGTCCCAACAATGTTTG
GACGGGAGCGATGAGGATACCACTCAACCAAACGTTGTGGTTGAAGTATCCTACGTTCGT
TCGCGGTTCGTCCTTGAAGCCCGATATCAGGAATTTCCGGGGTACTGGGGACATCAACTT
TTTCGATGGATTTCGAGCCGAAACCATCAACTCGGCTCGGAAGAGAAGAAGCGCCGGAGA
CTTCGACGATGATGAAGATGACGATGAAGAAATGATAGACATTTTGAAGATTCATGAGAG
GCACGCGAATGCCAAAAATATGAAAAAGGAATATTTGTCATCGCGGGATTATGAATTTCT
TGAAATAAAGAAGCACGTCCTGAAGTCGTACGGGAAATCTCACAAAATCTCCGCCAGTGC
CTGGGATATAATGCGAGGAAATAAACGGATGACGAAATCCCGGAGGAAAAGATCTGTCAA
GAAGATAATTGGCGGCGCGAGGGCAAGTCCCCGAAACTATCCGTGGCAGGTGGCATATTA
CATCACCGACTCCAGCGCCAATCCAACAGCTCATTTCTTTTGTGGCGGAACTCTCATCGA
TCGATATTGGGTGCTTACTGCCGCACATTGCCCGTATCGGGGAGACTTACACAATGTCGT
TCTGGGAGACTATGATCTCTTCGACGACGAGGGTACGGAACAGGAAATGTTAGTCGATGC
AATCTTCCTACGGAACAACTTTCAAGTTACACAGGATAAGAATAACGATATTGCTCTTAT
CAAGCTGAGGTATCCTGCCAGACAGACTCCCGCTGTTCAGTTGGCGTGCATATTAGGCAA
CAATCAAGAACCATTCGCGGAAGGCCACCCGTGCGTTACCACTGGATGGGGGCGGAGGGT
AGCAAATGAACGAGGCATTGAGCGATACCTCAGACAAGCTGAAATGCCCATCATTGCCAA
CTCGGTGTGTAAAGCTACGTTCTGGTCGTCATTTGAGATACACGATTCATACATTTGCGC
CGGAGGATCTGGGGAAAATTCGTGCAAGGGCGACTCTGGAGGACCATTGGTCTGCAAGAG
GCAAGATGACGGACTTTTCTATCTCGCTGGGATAACTAGCTGGGGCGATGCGTATTGTAA
AACCACGGTTCCCGGCGTGTTCACGCGCGTTCAAAGTTTCAACGATTGGATACATCGCAT
CATATCAAGACACGAATCNTGTGNCAATAAGTCATA
| ProSiteProfiles |
MAM_dom (IPR000998) - T[1-167] 36.358 |
| SMART |
MAM_dom (IPR000998) - T[1-167] 2.3E-34 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[2-165] 2.53E-39 |
| Pfam |
MAM_dom (IPR000998) - T[3-165] 5.4E-42 |
| CDD |
MAM_dom (IPR000998) - T[3-165] 1.94896E-44 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[168-205] 8.7E-7 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[168-204] 12.663 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[168-204] 6.41E-9 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[169-203] 8.8E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[169-203] 3.03192E-11 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[181-203] . |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[395-642] 4.95E-73 |
| SMART |
Trypsin_dom (IPR001254) - T[401-637] 8.1E-78 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[402-642] 31.954 |
| Pfam |
Trypsin_dom (IPR001254) - T[402-637] 1.7E-58 |
| CDD |
Trypsin_dom (IPR001254) - T[402-640] 8.83349E-78 |
| PRINTS |
Peptidase_S1A (IPR001314) - T[435-450] 1.0E-15 - T[492-506] 1.0E-15 - T[585-597] 1.0E-15 |
| ProSitePatterns |
TRYPSIN_HIS (IPR018114) - T[445-450] . |
| ProSitePatterns |
TRYPSIN_SER (IPR033116) - T[586-597] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTRL_HUMAN | 39.918 % | 174 | 6.62E-50 |
| CTRB2_HUMAN | 39.837 % | 171 | 1.13E-48 |
| CTRB1_HUMAN | 39.431 % | 171 | 1.14E-48 |
