- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g48678.01.t
Possible name(s)
MALRD1; MAMDC2; MAMDC4
Gene model
Location
chr9 [9,188,208 / 9,196,318]
Amino acid sequence
Length: 580
>Boschl.CG.Botznik2013.chr9.g48678.01.p
MIPADVFEKGPFHVIVEAERKNFEGDIAIDDLSVGACSASDEDARFPNTIITTTTSTTTL
ELVTTVPQTNLYDDGPVLLPDNINCAFERGNLCGWKQDRKDDVDWEISRKRTPSSGTGPF
SDHTTGHGWFIYLEASSAKTKQYSTILSPAINRKIRTCISFFYNMKGKSMGMLEVMSVQS
GGNKFTRKWMKDTEQSRNDTDWRFAQVTITESMPYQIAFRATRGSAFQSDIALDDIKVEG
QPCDDEKSKTDHTDAKPTVAERPGTNEHPLTCDFTTTTCQWQQAKGKNKDFDWDLATSST
THLDGTGPGADHTSGSRGGYIYIDASRQKIGLRASLISSQFKIDGPKCFRFWYHMXGTGI
GDLTIFKLIKKKMVXIWRXKGEKGXQWLEGMIDLQGNHIFSLVITATXGSDWKGDIALDD
FNITDGKCPTITCDFEYDNCGWMQETQNDHFNWTRRRGPTPSMNTRPNHDHTMKNANGTF
LYIEASKKQRFNEAWLMSPIIDPKVFAPKCLTFWYHAFGEGVGTIQVYSMPPHENGKYIG
SSLWSNFKNQGNQWLFTEITINETLPYKVCIEYSCHNVRT
Nucleotide sequence
Length: 1,743
>Boschl.CG.Botznik2013.chr9.g48678.01.t
TATGATCCCCGCGGATGTGTTTGAAAAGGGACCCTTTCAGGTGATTGTCGAAGCGGAACG
TAAAAACTTTGAAGGTGACATAGCAATCGACGACCTTAGCGTCGGGGCATGCTCAGCCAG
TGACGAAGATGCCCGATTTCCAAACACAATCATAACTACAACGACATCGACTACCACATT
GGAATTGGTGACCACCGTGCCGCAGACGAATCTGTACGATGATGGACCAGTATTGCTACC
AGATAACATCAACTGTGCCTTTGAACGGGGCAATTTATGCGGATGGAAACAAGATCGTAA
AGACGATGTAGATTGGGAGATATCTCGAAAGCGAACTCCAAGCTCTGGTACAGGCCCTTT
CTCTGATCACACAACAGGGGACGGCTGGTTTATCTACCTGGAAGCCTCATCTGCAAAAAC
CAAGCAATACAGCACGATTCTCAGTCCGGCAATCAACCGAAAAATTCGAACCTGTATTAG
TTTTTTCTACAATATGAAAGGGAAAAGCATGGGGATGCTGGAAGTCATGTCGGTTCAAAG
TGGTGGTAACAGATTTACTCGCAAATGGATGAAAGATACGGAACAAAGCAGAAACGACAC
CGATTGGAGATTTGCCCAGGTCACGATCACAGAATCAATGCCTTATCAAATTGCGTTTCG
CGCCACTCGCGGTTCAGCCTTCCAATCAGACATAGCGTTGGACGACATTAAAGTTGAAGG
CCAACCGTGCGATGATGAAAAGTCGAAGACCGATCATACGGATGCTAAACCAACGGTTGC
AGAAAGGCCAGGGACAAATGAGCATCCGCTGACATGTGATTTTACAACAACCACATGTCA
ATGGCAGCAGGCCAAGGGAAAAAACAAAGACTTTGATTGGGATCTCGCCACATCCTCAAC
GACTCATCTAGATGGCACTGGTCCCGGAGCCGACCACACGTCAGGCAGTAGGGGCGGCTA
TATATATATCGATGCTTCAAGACAAAAAATCGGTTTGCGTGCAAGTTTGATCAGCAGTCA
ATTCAAAATAGATGGTCCGAAATGCTTTCGATTTTGGTACCATATGNACGGAACAGGCAT
CGGAGACTTGACAATATTCAAACTCATTAAAAAGAAGATGGTANATATTTGGAGAACNAA
AGGCGAAAAGGGAANTCAATGGCTTGAGGGAATGATCGATTTGCAAGGCAATCACATATT
TTCGTTGGTGATAACTGCAACAAGNGGATCCGACTGGAAAGGAGATATCGCCTTAGACGA
CTTCAACATAACCGACGGAAAATGTGCAACAATCACTTGCGATTTTGAATATGACAATTG
CGGATGGATGCAGGAGACGCAAAATGATCATTTTAATTGGACAAGACGCAGAGGACCAAC
ACCATCAATGAATACCAGACCGAATCATGATCACACTATGAAAGATGCTAACGGAACTTT
TCTGTATATTGAGGCGTCGAAAAAGCAACGATTTAATGAGGCATGGTTGATGAGTCCGAT
CATAGATCCTAAAGTCTTTGCGGCAAAGTGTCTCACGTTTTGGTACCACGCTTTTGGGGA
AGGTGTTGGTACAATCCAAGTATACAGCATGCCACCACATGAGAATGGGAAGTACATCGG
TTCGTCACTGTGGTCAAATTTTAAAAACCAAGGAAATCAATGGCTTTTTACGGAAATCAC
TATCAATGAAACACTTCCATATAAGGTATGCATTGAATATTCATGCCACAATGTGCGTAC
CTA
| SMART |
MAM_dom (IPR000998) - T[80-245] 1.2E-34 - T[267-430] 1.9E-23 - T[431-577] 1.1E-15 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[82-243] 1.74E-36 - T[268-428] 6.8E-33 - T[428-576] 8.55E-30 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[83-245] 32.305 - T[270-430] 31.149 - T[431-572] 28.137 |
| Pfam |
MAM_dom (IPR000998) - T[85-243] 1.4E-38 - T[272-429] 6.3E-32 - T[433-573] 5.3E-33 |
| CDD |
MAM_dom (IPR000998) - T[85-243] 2.54099E-39 - T[272-428] 1.46773E-31 - T[433-575] 1.73162E-33 |
| PRINTS |
MAM_dom (IPR000998) - T[91-109] 4.5E-6 - T[130-146] 4.5E-6 - T[157-168] 4.5E-6 - T[207-221] 4.5E-6 - T[226-239] 4.5E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AEGP_HUMAN | 25.838 % | 149 | 1.02E-37 |
| MAMC2_HUMAN | 24.658 % | 127 | 9.58E-31 |
| MALR1_HUMAN | 25.926 % | 189 | 8.23E-51 |
