- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g43298.01.t
Possible name(s)
ACAN; BCAN; MRC2
Gene model
Location
chr9 [14,573,905 / 14,579,321]
Amino acid sequence
Length: 481
>Boschl.CG.Botznik2013.chr9.g43298.01.p
MEVKRNNESFLFFDVPMPWEGAFEYCEGIWGKLACPKTRDLHDWIVEKMLNGNFSLKEGP
FPFERWHKRGGFATEPNNAWCDEDCGAINLDISPPMWNDLHCVKKNPFICESVLPERCTY
NPPVTGDCLRSLLLESGCSKDGHGPVLDISRFHNATARTAAIHVNKIANFAKDSPGYGLY
EEACFGPEYILVNFSNGKEMELMFHLKPLTYEEAEATCAKDDAVLLPLTKLEVDNYVLPK
IDISADDIGSQLWWIGLSDRETEGIFRWSSGEPFVSAHADIHRWNSSDVVDNFASNNSND
CVVMNREEDWQWFEDNCSTRHSFICMKRSCDYPLSYKFHHRDYCVYLQHEPVLSEEQNSS
YGSVQEMANEYCSRSGGELFDVRDQVTADFLRDIVLISSGYQYHHSLKFWMPIVDKAAAN
TVDPRERNWIWNVDGVEEILNXSINXVKGLTRVKSSHFHFSTESSPSPSQRAEGRVRVVV
L
Nucleotide sequence
Length: 1,446
>Boschl.CG.Botznik2013.chr9.g43298.01.t
GATGGAGGTGAAGCGTAACAACGAGAGTTTTCTTTTCTTTGATGTCCCGATGCCTTGGGA
AGGTGCATTCGAATACTGTGAAGGTATTTGGGGCAAGCTGGCGTGTCCAAAAACACGGGA
CTTGCACGATTGGATAGTTGAAAAGATGCTGAACGGAAACTTTAGTCTGAAAGAAGGACC
TTTTCCGTTCGAGAGGTGGCATAAACGGGGGGGTTTTGCGACAGAGCCAAACAATGCTTG
GTGCGATGAAGATTGCGGTGCCATCAATCTTGATATTTCGCCGCCTATGTGGAATGACTT
GCACTGTGTCAAGAAAAACCCTTTCATTTGTGAATCTGTTTTGCCAGAGCGTTGCACATA
CAATCCACCAGTAACCGGAGACTGCCTGAGATCATTGCTTTTAGAGAGTGGGTGTTCAAA
AGATGGCCACGGTCCCGTCCTGGATATTTCCAGGTTTCATAATGCGACCGCCAGAACCGC
GGCCATACATGTCAATAAAATCGCCAACTTTGCAAAAGATAGTCCAGGATATGGCTTATA
CGAGGAAGCCTGCTTTGGGCCTGAATATATTCTGGTGAATTTCTCCAACGGAAAAGAAAT
GGAATTGATGTTTCATTTGAAGCCGCTAACTTATGAAGAGGCAGAGGCTACATGTGCTAA
GGATGACGCTGTATTGTTGCCGTTAACAAAACTTGAAGTAGACAATTATGTTCTTCCGAA
GATTGATATTTCCGCCGATGATATTGGATCTCAATTGTGGTGGATTGGGTTGAGTGATCG
TGAAACTGAAGGAATTTTTCGTTGGTCAAGCGGGGAACCTTTTGTATCAGCGCACGCAGA
TATCCACAGATGGAATAGTAGTGATGTGGTCGATAATTTTGCCTCGAACAATAGTAACGA
TTGTGTTGTGATGAATCGCGAAGAAGATTGGCAATGGTTTGAGGATAATTGCTCGACGAG
ACATTCGTTTATTTGCATGAAAGGAAGTTGCGATTATCCTCTTTCGTACAAGTTTCATCA
TCGTGATTATTGCGTGTATCTACAACACGAGCCAGTTTTATCCGAAGAGCAAAACAGTTC
ATATGGAAGTGTTCAGGAAATGGCTAATGAATACTGTTCCCGATCTGGAGGGGAACTGTT
TGATGTAAGGGATCAAGTTACGGCTGATTTCCTTCGCGATATCGTGTTGATCAGCTCAGG
ATACCAATATCACCATTCTTTGAGATTCTGGATGCCAATCGTAGATAAAGCGGCTGCTAA
CACAGTCGACCCGAGAGAGAGAAATTGGATTTGGAACGTTGATGGTGTCGAGGAAATATT
AAACACNTCTATCAATTTNGTGAAAGGTTTGACTCGAGTCAAGTCGAGTCATTTTCACTT
CAGCACCGAGTCAAGTCCGAGTCCAAGTCAGCGAGCAGAGGGTCGAGTCCGAGTCGTGGT
ATTATG
| SMART |
C-type_lectin-like (IPR001304) - T[1-111] 0.4 - T[173-326] 4.2E-6 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[2-111] 1.4E-9 - T[193-331] 2.5E-20 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[5-111] 10.829 - T[204-326] 15.207 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[6-119] 2.92E-14 - T[202-332] 2.62E-20 |
| ProSitePatterns |
C-type_lectin_CS (IPR018378) - T[85-110] . |
| Pfam |
C-type_lectin-like (IPR001304) - T[208-327] 7.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|
