- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr9.g10576.01.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
chr9 [18,566,447 / 18,568,304]
Amino acid sequence
Length: 618
>Boschl.CG.Botznik2013.chr9.g10576.01.p
MLLSIVTRKGGVLTNKSQLLRIHITSATTMKQLSSALRPIKKLKQCNIACVIPDPVIWRQ
FQTKAGKSVKNLNSSPRITVSGDSIQEQASQLATELDLSKKERLGLQLGMQQGLSLRNIT
VTEDEPKGWKGMKFHWEIIPVVLVAIFLYRLLSSSVDIKMSFGMPPNNYLADIPSTTFDD
VKGIDEVKGELEEIVDFLKDPDRFTNLGAKLPKGILLVGPPGTGKTLLARAVAGQAGVPF
FYAAGSEFEEMFVGVGGSRIRQLFKEARDNSPCIIFIDEIDACGSARTSSPLAPYGRITI
NQLLQEMDGFETKQGIIVIGATNMPDVLDKALTRPGRFDTQISVLPPDVRGRREILEHYA
SKVTSSLHLDLQKIASLTGGMTGADLSNLVNQAALTAAEKNKDLVDMEDFENALDKLRLG
PELNTRIRTKKELEITAFHEAGHALVAYYSKNSLPIFKVTIAQRGHALGHTSLIPTEEDE
TQVTRAKIMWKIDVAMGGRVAEELMNGNANVTTGASNDLEMATKLAYSLVCDFGMSEALG
LVAVDLKKASPEKKRIIEEEVNKILTASYNRAKTLLSEKSHQHNLLSKALLKYETLNLEQ
IKAIFSHNTVDCLQESRN
Nucleotide sequence
Length: 1,857
>Boschl.CG.Botznik2013.chr9.g10576.01.t
TGTTGTTGTCGATTGTAACTCGTAAAGGGGGCGTCTTGACGAATAAATCCCAGCTTTTGA
GGATACATATCACCAGCGCGACCACTATGAAGCAGCTTTCGTCAGCGTTGCGGCCAATAA
AAAAGTTGAAGCAATGCAATATTGCGTGTGTGATACCCGATCCCGTAATATGGCGTCAGT
TCCAAACGAAAGCTGGTAAATCGGTAAAAAACTTGAACTCGTCTCCACGAATTACAGTTT
CAGGAGATTCCATACAAGAACAAGCTTCACAGTTGGCTACAGAACTGGATCTCAGCAAAA
AAGAACGCCTCGGCCTTCAACTGGGCATGCAGCAAGGGCTGTCCTTGAGAAATATCACAG
TTACTGAAGATGAGCCAAAGGGATGGAAGGGTATGAAATTTCATTGGGAAATTATCCCTG
TTGTTCTGGTAGCCATTTTCCTGTACAGATTGTTAAGTTCATCGGTGGATATTAAAATGT
CTTTTGGCATGCCGCCAAACAATTACCTAGCCGACATTCCATCAACCACATTCGATGATG
TAAAAGGTATTGATGAAGTTAAAGGAGAACTAGAAGAAATTGTGGATTTCTTGAAAGATC
CAGATAGGTTTACAAATCTCGGTGCTAAATTACCAAAAGGAATCTTGTTAGTCGGGCCTC
CTGGCACTGGGAAAACTCTTCTAGCAAGAGCTGTCGCAGGACAAGCTGGCGTACCGTTTT
TCTATGCGGCTGGGTCTGAGTTTGAGGAGATGTTTGTCGGCGTTGGCGGTTCAAGAATAA
GACAACTTTTCAAAGAGGCACGTGATAACTCACCTTGCATTATATTTATTGATGAAATTG
ATGCTTGCGGAAGTGCTAGGACTTCATCACCGTTAGCTCCTTATGGACGCATAACTATCA
ATCAACTTCTGCAGGAGATGGATGGGTTTGAAACAAAACAAGGTATTATCGTCATTGGTG
CAACCAATATGCCGGATGTATTAGACAAAGCTTTGACTCGACCAGGAAGATTCGACACTC
AGATTAGCGTGCTACCTCCAGACGTTAGAGGAAGAAGAGAGATTCTTGAGCATTACGCCA
GCAAAGTGACAAGTTCACTCCACTTGGATCTCCAAAAAATTGCCAGTTTAACCGGTGGAA
TGACTGGGGCTGATTTGTCAAATCTTGTAAATCAGGCTGCACTTACGGCAGCAGAAAAAA
ATAAAGACCTTGTTGATATGGAAGATTTCGAAAACGCTTTGGATAAGTTGCGACTTGGCC
CGGAATTAAACACGCGTATAAGGACTAAAAAGGAACTAGAAATCACAGCGTTTCATGAAG
CCGGCCATGCACTTGTAGCCTACTACTCGAAAAACTCTTTACCGATTTTTAAAGTGACTA
TCGCCCAACGGGGTCACGCGTTAGGCCACACATCCTTAATACCCACAGAAGAAGATGAAA
CGCAAGTAACAAGGGCCAAAATTATGTGGAAAATTGACGTAGCCATGGGTGGGCGGGTAG
CTGAAGAGCTCATGAATGGTAACGCCAATGTCACAACCGGAGCTTCTAACGATCTGGAAA
TGGCCACAAAGTTGGCATATTCCTTAGTGTGTGACTTTGGGATGTCGGAAGCTTTAGGTC
TGGTAGCCGTAGACTTGAAAAAGGCGAGTCCCGAAAAGAAAAGAATCATTGAGGAAGAGG
TGAACAAGATTTTGACTGCCTCCTACAACCGTGCGAAGACGCTTTTATCGGAGAAAAGCC
ACCAACACAATCTTCTCTCTAAAGCTTTGTTAAAATATGAAACTCTGAATTTAGAACAGA
TAAAAGCCATATTCAGTCACAACACAGTTGATTGCTTACAAGAATCAAGAAATTGAT
| TIGRFAM |
FtsH (IPR005936) - T[134-605] 4.8E-164 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[172-416] 2.15E-67 |
| SMART |
AAA+_ATPase (IPR003593) - T[211-348] 1.1E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[215-343] 4.1E-40 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[316-334] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[407-604] 6.5E-57 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[428-609] 5.89E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 39.686 % | 322 | 5.7E-100 |
| AFG32_HUMAN | 40.9 % | 355 | 1.25E-112 |
| YMEL1_HUMAN | 52.542 % | 491 | 2.16E-165 |