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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr8.g52901.01.t

Possible name(s)

FCN2; TNXB

Location

chr8 [1,309,591 / 1,314,928]

Sequences

Amino acid sequence

Length: 210

>Boschl.CG.Botznik2013.chr8.g52901.01.p
MHPTYFLVFLTGLVTAHNDVTTFQELVCQHCASLLGPSADMGASPRVGKAGPMGTPGPRG
PPGIGSPGPRGPPGDGLPGPRGQPGEVNETAIREIVXXXXIXIALQLFQNQTKTDRDWVV
FQRRMDGSVDFYRGWNDYANGFGNKDGEFWLGLEKLHRLTKIGQHELRVNMIESDGTYWT
AKYRLYYFSLYSIFTVRLVNTHIFLRVTCP

Nucleotide sequence

Length: 633

>Boschl.CG.Botznik2013.chr8.g52901.01.t
TGCACCCCACTTATTTTCTCGTTTTCCTGACGGGTCTTGTCACGGCGCACAATGACGTTA
CAACATTTCAAGAGTTGGTATGCCAGCATTGTGCCTCCTTGTTGGGTCCTAGTGCAGATA
TGGGTGCCAGTCCAAGAGTAGGCAAGGCTGGTCCGATGGGAACTCCCGGCCCCAGAGGCC
CTCCGGGAATTGGCTCCCCTGGACCCAGAGGACCGCCAGGAGACGGATTGCCAGGACCAA
GGGGTCAACCGGGAGAAGTGAATGAGACTGCCATACGAGAAATTGTAATNNCGATNGNAA
TAANTATCGGTCTGCAGCTATTTCAGAACCAAACAAAGACAGATCGGGATTGGGTGGTGT
TTCAGCGCCGCATGGATGGATCTGTAGATTTCTATCGGGGTTGGAATGATTACGCTAATG
GATTCGGAAACAAAGATGGAGAATTCTGGCTCGGACTTGAAAAACTACACCGGCTTACTA
AAATTGGACAGCATGAATTGCGCGTAAACATGATCGAAAGCGATGGAACGTATTGGACAG
CAAAGTACAGGTTGTATTATTTTTCATTATATTCTATATTCACAGTAAGACTGGTAAATA
CGCATATATTCCTACGAGTAACATGTCCATAAG

InterProScan

ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[68-183] 18.123
SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[90-208] 1.2E-6
Gene3D
Fibrinogen_a/b/g_C_1 (IPR014716) - T[90-192] 3.7E-31
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[103-187] 2.6E-24
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[104-187] 2.36E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FCN1_HUMAN 37.349 % 100 1.48E-25
FCN2_HUMAN 55.072 % 85.5 5.31E-20
TENX_HUMAN 40.816 % 87.4 5.37E-20