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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr8.g47510.01.t

Possible name(s)

RPS3A

Gene model

Boschl.CG.Botznik2013.chr8.g47510

Location

chr8 [965,344 / 970,769]

Sequences

Amino acid sequence

Length: 266

>Boschl.CG.Botznik2013.chr8.g47510.01.p
MAVGKNKRLTKGGKKGNKKKIVDPFSKKDWYDVKAPAMFKQRQIGKTLVSRTVGTKIASD
GLKGRVFECNQADLHGDESTYRKMRLIVEEVQGKHCLTNFHGMSLTRDKLCSMVKKWQTL
IESNVDLMTTDGYKVRLFCIGFTHRRNNQIKKTSYAQHQQIRNIRRKMVEIMTREVTSSD
LREFVNKLIPDSIAKDIEKACQGIYPLHDVYIRKVKILKKPKFDVGRLMEIHGEGKGAKT
AATEEGDTGTKVSRADGFEPPVQDTV

Nucleotide sequence

Length: 801

>Boschl.CG.Botznik2013.chr8.g47510.01.t
AATGGCTGTCGGCAAGAATAAGCGCCTCACCAAAGGCGGTAAAAAAGGTAACAAGAAGAA
GAGTGTTGACCCGTTCTCCAAAAAAGACTGGTACGATGTCAAAGCTCCGGCGATGTTCAA
GCAGCGCCAAATTGGAAAGACGCTTGTGTCTAGAACAGTGGGGACCAAGATTGCGTCAGA
CGGCTTGAAAGGAAGAGTGTTCGAGTGCAATCAGGCTGACCTTCACGGTGATGAATCAAC
GTACAGAAAAATGAGACTTATCGTCGAAGAAGTGCAAGGAAAACATTGTCTCACAAATTT
CCATGGCATGTCACTGACGAGGGATAAACTCTGCTCCATGGTAAAGAAATGGCAGACTCT
CATCGAATCGAACGTTGATCTCATGACGACTGACGGCTACAAAGTGCGTCTCTTCTGCAT
CGGTTTCACCCACAGAAGAAATAACCAGATCAAGAAAACTTCTTACGCGCAACACCAACA
GATTCGTAACATCCGAAGGAAGATGGTCGAGATCATGACCCGCGAAGTGACGTCCTCTGA
CCTCCGGGAATTCGTGAACAAGCTCATTCCCGATTCGATCGCCAAGGATATCGAGAAGGC
TTGCCAGGGCATCTATCCACTGCATGATGTTTACATTCGTAAGGTGAAAATTCTGAAGAA
GCCAAAGTTCGATGTTGGTCGACTCATGGAAATCCACGGCGAAGGAAAGGGGGCCAAGAC
CGCTGCGACTGAGGAAGGTGACACCGGCACCAAGGTCAGCAGAGCTGATGGCTTTGAGCC
ACCTGTGCAAGATACTGTTTG

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[1-266] 40.736
Pfam
Ribosomal_S3Ae (IPR001593) - T[16-221] 4.8E-99
SMART
Ribosomal_S3Ae (IPR001593) - T[16-221] 4.4E-138

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 75.188 % 409 5.2E-146