- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr7.g63408.01.t
Possible name(s)
TBX19; TBX6; TBXT
Gene model
Location
chr7 [1,954,605 / 1,956,796]
Amino acid sequence
Length: 154
>Boschl.CG.Botznik2013.chr7.g63408.01.p
MIVTKSGRRMFPVLKVTATGLEPTSMYSFHLYFASSDLHRWKYVNGDWIPGGKPEPHTPP
CVYVHPDSPNFGAHWMKQPVSFNKVKLTNKGNGGSQQIMLNSLHKYEPRIQVVKVGVDSS
SQRTIATFSFPETKFIAVTAYQNEEVCINFLYVI
Nucleotide sequence
Length: 465
>Boschl.CG.Botznik2013.chr7.g63408.01.t
AATGATAGTGACAAAAAGCGGACGACGTATGTTCCCTGTACTGAAAGTTACCGCCACCGG
ACTGGAACCTACTTCCATGTACTCGTTCCATTTATATTTTGCCTCGTCGGACCTGCACAG
ATGGAAGTATGTCAACGGAGACTGGATTCCTGGTGGCAAGCCAGAACCGCATACTCCACC
TTGCGTATACGTGCATCCGGATTCGCCGAATTTCGGCGCACATTGGATGAAGCAACCGGT
CAGCTTCAATAAAGTGAAACTGACTAACAAAGGAAATGGAGGAAGTCAGCAAATCATGCT
GAATTCACTGCACAAATATGAGCCACGTATTCAAGTGGTCAAAGTTGGAGTCGATTCCTC
GTCACAGAGAACCATCGCCACGTTCTCGTTTCCTGAGACGAAATTTATCGCTGTAACAGC
GTATCAAAATGAAGAGGTTTGCATCAACTTCCTATACGTGATATG
| Gene3D |
T-box_sf (IPR036960) - T[1-149] 2.7E-59 |
| SMART |
TF_T-box (IPR001699) - T[1-151] 5.5E-59 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-146] 56.997 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-146] 1.16E-56 |
| Pfam |
TF_T-box (IPR001699) - T[1-146] 1.9E-52 |
| PANTHER |
TF_T-box (IPR001699) - T[1-146] 5.6E-90 |
| PRINTS |
TF_Brachyury (IPR002070) - T[43-63] 2.0E-14 - T[104-121] 2.0E-14 |
| PRINTS |
TF_T-box (IPR001699) - T[63-76] 2.6E-24 - T[80-89] 2.6E-24 - T[99-113] 2.6E-24 - T[133-146] 2.6E-24 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[64-82] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAC_HUMAN | 73.288 % | 228 | 1.96E-74 |
| TBX19_HUMAN | 68.493 % | 215 | 3.36E-69 |
| TBX6_HUMAN | 49.66 % | 149 | 4.67E-44 |