Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'AHC0AAA60YD12'
  2. Transcript 'KH2012:KH.C8.275.v1....'
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g43111.01.t

Possible name(s)

MFSD6; MFSD6L

Location

chr7 [7,830,631 / 7,834,308]

Sequences

Amino acid sequence

Length: 461

>Boschl.CG.Botznik2013.chr7.g43111.01.p
MMQLVSLFSPPIAGLVTDKTKAYRMIIGSLFFFSVAFTIPFYFVPSEEAAYTTVNVDCCL
PAGELSRVVCDRNTSVDNHTICSTDMNTSVVMDSELYVECTGAHVNCTLPLENKDSYGVT
FALLVAFTALMSFFLAPMTPLLDSSAMDTLGRDRVGSYGAQRLWGAVGFGIVGLGVGYLT
DVVSPVEIYGQYSKNYLVAFCSVVVFWVGALVVMVTSVKISAPKAKGILLGLKLLLVKIE
ILFFLFIVLVSGFATGVQYSYLFWYLQDFGDFGQLILGLSVLITCLSEIPMFWISGWICQ
TFGYVSVLSIGLCAVSIRFFVYSVITNAWQILAVEWLHGISFALPMTAMCSYATVVAPKD
AVATLISFSQTVYWGIGNMLGALCGGLLYQHFGATVLFRVTAIICFSCAFLYWISLGPFG
VLGFCKLDKGREGVVEAGVDEKAECDQVYEEKLLKEEPAEV

Nucleotide sequence

Length: 1,386

>Boschl.CG.Botznik2013.chr7.g43111.01.t
AATGATGCAACTTGTTTCGCTGTTCTCCCCTCCCATCGCTGGATTAGTAACCGACAAGAC
AAAAGCGTACAGAATGATCATCGGATCGTTGTTTTTCTTCTCGGTGGCATTCACGATTCC
ATTCTACTTCGTACCTTCCGAAGAAGCCGCATACACCACGGTTAATGTTGATTGCTGCTT
GCCTGCTGGAGAATTATCACGGGTCGTATGTGATCGAAATACTTCTGTGGACAATCATAC
CATCTGTTCTACAGACATGAATACGTCGGTAGTGATGGATAGTGAACTGTATGTCGAGTG
CACGGGCGCACATGTAAACTGCACGTTACCTTTAGAGAACAAGGATAGCTATGGAGTAAC
ATTTGCACTTCTGGTAGCATTCACGGCGTTAATGTCATTTTTTCTGGCTCCAATGACACC
ACTGTTAGACTCATCTGCCATGGACACACTGGGGAGGGACCGTGTGGGTAGTTACGGGGC
TCAGAGATTGTGGGGCGCTGTGGGATTCGGTATTGTTGGACTTGGTGTTGGCTATTTGAC
GGACGTCGTCAGCCCGGTTGAGATTTACGGCCAATATTCGAAGAACTACCTTGTGGCGTT
TTGCAGCGTTGTCGTGTTTTGGGTTGGTGCTCTCGTCGTTATGGTAACATCGGTCAAAAT
TTCGGCGCCAAAAGCAAAAGGAATTTTGCTTGGTTTGAAATTGCTGCTCGTAAAGATTGA
GATATTGTTTTTCCTCTTCATCGTTCTCGTCAGTGGGTTTGCAACTGGGGTGCAATATTC
GTACCTGTTTTGGTACTTGCAAGATTTCGGCGATTTCGGACAGTTGATTCTGGGACTGTC
TGTTCTGATCACTTGCCTATCCGAAATTCCGATGTTTTGGATATCTGGATGGATTTGTCA
GACGTTTGGATACGTATCGGTGCTTTCTATTGGATTATGTGCAGTTTCGATCCGCTTCTT
CGTCTATTCCGTAATAACTAACGCGTGGCAAATCCTTGCTGTGGAATGGTTACACGGTAT
TTCTTTCGCTTTGCCTATGACCGCAATGTGTTCGTATGCGACTGTCGTTGCACCGAAAGA
TGCAGTGGCTACGTTGATTTCGTTCAGCCAAACCGTTTATTGGGGCATCGGTAACATGCT
TGGTGCGTTGTGTGGCGGTCTTCTCTATCAACACTTTGGAGCTACAGTGTTATTTCGAGT
GACAGCCATTATATGCTTCAGTTGTGCCTTTTTGTATTGGATCTCCCTCGGACCGTTTGG
GGTGCTGGGATTTTGCAAGTTGGATAAAGGCCGAGAAGGAGTTGTGGAAGCAGGTGTTGA
CGAAAAAGCGGAATGCGATCAGGTTTACGAAGAAAAACTTTTGAAAGAAGAACCCGCAGA
AGTTTA

InterProScan

Pfam
MFS_assoc_dom (IPR024989) - T[3-400] 3.5E-65
SUPERFAMILY
MFS_trans_sf (IPR036259) - T[3-44] 8.11E-35 - T[116-415] 8.11E-35
CDD
MFS_dom (IPR020846) - T[116-414] 6.67557E-12
ProSiteProfiles
MFS_dom (IPR020846) - T[240-461] 9.187

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MFSD6_HUMAN 26.48 % 103 2.3E-23