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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S38...' > 
  2. EST 'BW350373' > 
  3. Transcript 'KH2012:KH.C2.216.v2....' > 
  4. Transcript 'KH2012:KH.C2.216.v1....' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g39942.01.t

Possible name(s)

SMTN; SMTNL1; SMTNL2

Gene model

Boschl.CG.Botznik2013.chr7.g39942

Location

chr7 [9,280,129 / 9,290,539]

Sequences

Amino acid sequence

Length: 427

>Boschl.CG.Botznik2013.chr7.g39942.01.p
KDLDSAGNASVDKMDDAKTDTCDDTVADEPETTPDVGVEKKESVSSLENERYDDKKETEG
EAEEKSESDEEKSVEIAADVVSDEPDKELSLNKNDTVSESPQIEIDDESPPLSPYKSPAA
TEEPQIHTVEAAQVEVTPQDSVPETVDVETTEDKPEDTPDTPKPKSRKAKKSKKKELKEE
PKEVEAETKSSDQVDETPPVIKEEDTKKNISPPAEEKEETDPMRNLESISDITVLEKMVC
IQLVDKPATDLASKYSLNKTEKPSTRMAASAGKKKVGSIFDRGEEEEDTRRRKPTSRMAD
VEKRQAERRRELQRNRSMPATSSKDARKAFVAKLEADAPKSQPKKVGRSPTFVVPNANNV
KQLLLKWCQSKTRGYDHVDIMNFSSSWASGMAFCALVHNFFPDAFDYSKLDPKNKAENMD
LAFKKAE

Nucleotide sequence

Length: 1,286

>Boschl.CG.Botznik2013.chr7.g39942.01.t
TAAAGACTTGGATTCAGCTGGTAATGCTTCGGTAGACAAGATGGACGACGCTAAAACCGA
CACTTGTGACGACACAGTCGCCGATGAACCGGAAACTACGCCGGATGTTGGTGTAGAAAA
AAAGGAGAGCGTAAGCTCTCTCGAAAACGAGAGATACGACGATAAAAAAGAAACGGAAGG
CGAGGCCGAGGAAAAGAGTGAGTCGGACGAGGAGAAAAGTGTGGAAATAGCGGCAGACGT
TGTCAGCGACGAGCCCGACAAAGAATTATCGCTAAACAAAAACGATACCGTGTCAGAATC
GCCACAAATTGAAATCGATGACGAATCGCCCCCTCTGTCTCCTTATAAATCACCTGCCGC
TACAGAGGAACCACAAATTCATACCGTCGAAGCAGCGCAGGTAGAGGTAACACCACAAGA
CAGCGTACCCGAAACAGTTGACGTGGAAACAACCGAGGATAAGCCAGAAGATACGCCGGA
CACGCCGAAGCCTAAATCCCGCAAGGCCAAGAAAAGTAAGAAAAAAGAACTAAAGGAAGA
ACCAAAAGGGGTAGAAGCCGAAACGAAGTCGAGCGATCAAGTCGACGAGACGCCGCCGGT
TATCAAAGAAGAAGATACAAAGAAAAATATATCTCCACCCGCGGAAGAAAAAGAGGAAAC
GGACCCGATGCGTAACCTGGAGTCTATTTCAGATATTACAGTGCTGGAGAAAATGGTATG
TATTCAACTTGTCGGCAAGCCTGCCACCGACCTCGCTTCTAAATATTCGTTGAACAAAAC
GGAGAAACCATCCACGCGTATGGCGGCGTCCGCCGGCAAAAAGAAGGTGGGCAGCATCTT
CGACCGCGGCGAAGAGGAAGAGGACACCAGGCGACGCAAGCCCACGTCGCGTATGGCCGA
CGTGGAGAAGCGTCAAGCCGAAAGGCGGCGGGAGCTGCAGCGTAACAGATCGATGCCGGC
CACTTCGTCGAAGGACGCGCGCAAGGCTTTCGTGGCCAAGCTGGAGGCTGACGCGCCAAA
GTCGCAGCCTAAGAAAGTCGGCCGCAGCCCCACTTTCGTGGTACCAAACGCAAATAACGT
GAAGCAGCTACTGCTAAAGTGGTGTCAATCGAAAACGAGAGGATATGACGATGTCGACAT
CATGAACTTCTCCAGCAGCTGGGCGTCGGGCATGGCGTTCTGCGCGCTAGTACACAATTT
CTTCCCCGACGCTTTTGACTACAGCAAACTCGACCCTAAGAACAAAGCCGAGAACATGGA
CCTCGCATTCAAAAAAGCCGAGTGAG

InterProScan

SUPERFAMILY
CH_dom_sf (IPR036872) - T[351-427] 4.45E-21
Gene3D
CH_dom_sf (IPR036872) - T[355-427] 2.2E-25
ProSiteProfiles
CH-domain (IPR001715) - T[358-427] 12.102
Pfam
CH-domain (IPR001715) - T[360-427] 2.3E-14
CDD
CH-domain (IPR001715) - T[361-427] 5.71015E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMTN_HUMAN 55.063 % 188 1.68E-52
SMTL2_HUMAN 53.077 % 153 8.18E-42
SMTL1_HUMAN 52.475 % 123 5.65E-31