- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr7.g37417.01.t
Possible name(s)
LRRIQ4; SCRIB
Gene model
Location
chr7 [15,245,948 / 15,248,064]
Amino acid sequence
Length: 236
>Boschl.CG.Botznik2013.chr7.g37417.01.p
MRILPSVALSDLSRRGSRISSRVPPVNPWRSSTAISHDYVSSLKSVPTSSKRGTRILTKM
ERPTFKMAGSELNELPNTVFKMENLENLVLSPDENSCLHSKLQYLPKEVGNLLNLRQLVL
DTNELEEIPNQLADLKHLDTLTLSNNHLAALPEGFSKLTKLHSLHLANNRFTAIPVGVCH
LENLTFLDLSDNAIQVIPEEICLLADKLSTLILYINDLEELPDCICDLQTLTTLWL
Nucleotide sequence
Length: 709
>Boschl.CG.Botznik2013.chr7.g37417.01.t
AATGAGAATTTTACCATCAGTGGCATTAAGCGACTTATCTAGGCGAGGGTCGCGAATCTC
CAGCCGTGTACCACCCGTCAATCCCTGGCGTTCCTCCACCGCAATAAGCCACGATTACGT
TTCGTCTTTGAAATCCGTACCCACATCGAGCAAACGGGGAACGAGAATATTAACGAAAAT
GGAACGGCCCACATTTAAAATGGCGGGATCTGAGTTAAACGAATTACCGAACACCGTTTT
CAAGATGGAGAATTTGGAAAATCTAGTTCTGAGTCCGGATGAAAATTCGTGTTTGCAGTC
GAAACTGCAGTATTTGCCGAAGGAAGTTGGTAATCTTTTGAATTTGAGGCAGCTTGTTCT
GGACACCAACGAATTAGAAGAAATACCTAACCAACTGGCAGACCTGAAACATCTCGATAC
TCTGACCCTCAGCAACAATCATCTCGCAGCTCTACCGGAAGGATTTTCCAAACTGACAAA
GTTACACAGTCTACACCTCGCAAACAATAGATTCACCGCGATTCCTGTTGGTGTTTGTCA
TCTGGAAAACCTCACATTTTTGGATTTGAGCGACAATGCAATCCAGGTGATTCCGGAGGA
AATATGCCTTCTTGCGGATAAGCTTTCAACTCTGATCCTCTACATAAACGACTTGGAAGA
ACTTCCAGATTGCATTTGCGATCTGCAGACATTGACAACACTATGGCTA
| Gene3D |
LRR_dom_sf (IPR032675) - T[41-168] 4.9E-22 - T[169-236] 2.3E-12 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[112-134] 22.0 - T[135-157] 0.051 - T[158-180] 1.6 - T[181-204] 0.01 - T[207-228] 260.0 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[114-136] 7.204 - T[137-159] 6.742 - T[160-181] 6.156 - T[183-204] 8.682 - T[207-229] 5.479 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[160-216] 2.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRRC1_HUMAN | 35.714 % | 85.1 | 4.35E-19 |
| SCRIB_HUMAN | 35.897 % | 98.2 | 1.78E-23 |
| LRIQ4_HUMAN | 32.37 % | 87 | 1.03E-19 |