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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g09928.01.t

Possible name(s)

ARHGAP45; SYDE1; SYDE2

Gene model

Boschl.CG.Botznik2013.chr7.g09928

Location

chr7 [11,880,800 / 11,886,360]

Sequences

Amino acid sequence

Length: 222

>Boschl.CG.Botznik2013.chr7.g09928.01.p
ASGDSNLLSTFDVATNGHDTETSAKRHSSVMLRLVEIEKRVSLPPAEKATLYALLNHLKR
ISANHERNKMTCQNLAVCFGPVLLGSVNSPPAKGLDLNAAIGFKQHIQVLNFMVTNWPAE
PVRLSDFETASSTANKTGENSESGHASASHRISTVSLTRRISWFPQGMDDTDDTDGEMLD
VEPFYHGDNFVFRHSQRSGSLTDILESNIDGAGEDGDFDTEV

Nucleotide sequence

Length: 671

>Boschl.CG.Botznik2013.chr7.g09928.01.t
GACGCGAGCGGCGACTCTAATCTGCTATCGACCTTTGACGTCGCCACAAACGGTCACGAC
ACGGAAACCTCGGCCAAGCGCCATTCCAGTGTCATGCTGAGACTCGTCGAGATCGAGAAA
CGCGTGTCGCTGCCGCCCGCCGAAAAGGCGACGCTGTACGCGTTGCTGAACCATCTGAAA
CGGATATCGGCCAATCACGAGAGGAACAAGATGACGTGCCAGAATCTGGCGGTTTGCTTT
GGGCCGGTGTTGCTGGGTTCTGTGAACTCTCCGCCGGCCAAAGGCTTGGATTTGAACGCG
GCGATCGGATTCAAGCAACACATACAAGTGCTCAACTTCATGGTGACCAATTGGCCGGCC
GAACCTGTCCGGTTGTCTGATTTTGAGACGGCGTCCTCCACGGCGAACAAGACGGGCGAG
AATTCCGAATCAGGTCATGCGTCTGCGTCGCATAGGATCAGCACAGTCAGCCTTACCAGG
AGGATAAGCTGGTTTCCGCAAGGTATGGACGACACGGACGATACCGACGGCGAGATGTTG
GACGTGGAACCGTTTTATCACGGCGATAACTTTGTGTTTCGACATTCGCAACGCAGCGGG
TCGCTGACCGATATCCTGGAATCCAACATCGATGGAGCCGGAGAAGATGGCGACTTTGAC
ACTGAAGTCTG

InterProScan

ProSiteProfiles
RhoGAP_dom (IPR000198) - T[1-121] 15.194
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[9-122] 3.7E-18
Pfam
RhoGAP_dom (IPR000198) - T[39-86] 8.4E-15
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[41-118] 1.61E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SYDE2_HUMAN 40.87 % 88.2 3.69E-20