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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA145YE23' > 
  2. Transcript 'KH2012:KH.S1740.2.v1...' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr6.g61673.01.t

Possible name(s)

CNOT3

Gene model

Boschl.CG.Botznik2013.chr6.g61673

Location

chr6 [3,305,076 / 3,307,236]

Sequences

Amino acid sequence

Length: 719

>Boschl.CG.Botznik2013.chr6.g61673.01.p
MADKRKLQSEIDRCLKKVQEGVETFEDIWQKLHNAANTNQKDKYESDLKKEIKKLQRLRD
QIKTWAASNDIKDKKSLLENRKLIETQMERFKVVERETKTKAYSKEGLGLAAKIDPAQKE
REQTRQWLQQTIDKLRLQMDIFESRIESSSLSSRKKKGDGDKQKQNEELKNLVDRHNYHI
NKLEMLMRXLDNQTITPDXXNDLKDDLEYYXEYCEDPXXEENEFLYEDLNLXEAXALTIM
PATSPVEKXLNXSMTNNSSVKGDEEEAGKTDVTSSTSPLPASSHSSTSSHNGKEDATEAR
SRNRSGTSDDILSPRKGSISYSTTTANSSKSVSRSQSAGATPSKAAPKTTNQAYAAAASG
QVHNHINSTPASNESHSSSVDRRAAIKNLTNALQKSSEKVMSWKTQTNAGSMSESNTEAQ
NAVNDMLSAATPNPMPVDGPVTTTESAVLTNGGFTNSSPDDATQHAKPSLSPLIADLQNS
NHGEYGNYLNASFASLKTIAEKALENARLGQADSNGTNALAVSTANLSLNSSDAKTEQNT
TTQSNLSRQTPAGSGETRMTPLLGVAPLGPIPLGKDNVYQQAMLDASWRHMPHPSDSERL
RHYLPRNPCPTPAYYHQTPLPHHHSIDFYLRLSTETLFFIFYYMEASQAQYLAAKALKKQ
SWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRELP

Nucleotide sequence

Length: 2,160

>Boschl.CG.Botznik2013.chr6.g61673.01.t
CATGGCTGATAAACGAAAATTACAAAGCGAGATTGACCGGTGTTTGAAGAAGGTGCAGGA
GGGCGTCGAAACGTTCGAAGACATCTGGCAGAAGCTGCACAACGCTGCCAACACGAATCA
GAAAGACAAATACGAGAGCGATTTGAAAAAGGAAATTAAAAAACTCCAGCGGTTACGGGA
TCAAATCAAGACGTGGGCGGCTTCCAATGACATCAAAGACAAAAAATCGTTACTGGAAAA
CCGAAAGTTAATTGAAACGCAAATGGAGCGTTTTAAAGTCGTAGAACGGGAAACGAAGAC
CAAAGCGTATTCAAAAGAAGGCCTAGGCCTCGCGGCGAAAATCGATCCCGCCCAGAAAGA
GAGAGAGCAAACGAGGCAGTGGTTGCAGCAGACGATAGACAAACTCAGGTTGCAGATGGA
CATATTCGAGAGCAGAATAGAGAGTAGCTCGTTGAGTTCAAGAAAGAAGAAAGGAGACGG
AGACAAGCAGAAACAAAACGAAGAGCTTAAGAACTTAGTCGATCGTCACAACTACCACAT
CAACAAGCTGGAAATGCTGATGCGAATNCTCGACAATCAGACGATAACGCCGGACAGNAT
NAACGACTTGAAAGACGATTTGGAGTATTACNCGGAGTACTGCGAGGACCCGGANTTNGA
AGAAAACGAGTTTCTGTACGAAGATTTGAATTTGGANGAGGCGNTAGCGTTGACGATCAT
GCCGGCGACATCGCCTGTCGAGAAAAANCTCAACANCAGTATGACGAATAACTCTTCTGT
GAAGGGAGACGAGGAAGAGGCGGGTAAGACCGATGTTACATCTTCGACATCGCCCTTGCC
CGCTAGCAGTCATTCTTCTACGTCGAGTCATAACGGTAAGGAGGACGCCACGGAGGCGCG
GTCTAGAAACAGGTCGGGTACATCAGACGATATACTGTCGCCGAGAAAAGGCTCGATATC
ATATTCCACCACCACAGCCAATTCCTCAAAATCCGTGTCCAGGAGTCAGTCGGCCGGCGC
CACGCCGAGTAAAGCCGCCCCGAAAACGACAAACCAGGCGTACGCAGCGGCCGCCAGCGG
CCAAGTACACAATCACATCAACAGCACGCCAGCGTCGAATGAATCACATTCCAGTTCGGT
CGACCGCAGAGCGGCCATTAAAAATTTGACCAACGCCTTGCAAAAGTCTTCGGAGAAGGT
TATGTCTTGGAAGACGCAGACAAACGCCGGGTCTATGTCGGAATCAAACACAGAAGCGCA
GAATGCGGTGAATGACATGCTTTCGGCTGCCACTCCGAATCCGATGCCCGTTGACGGGCC
AGTCACGACTACTGAATCTGCGGTACTGACGAACGGGGGTTTCACGAATTCGAGTCCCGA
CGACGCGACGCAGCACGCGAAGCCGTCTCTGTCTCCGCTGATCGCAGACTTGCAAAATTC
CAATCACGGAGAGTACGGGAACTATCTCAACGCCAGCTTTGCGAGTCTGAAGACGATCGC
GGAAAAGGCGTTGGAAAACGCGCGCCTGGGACAAGCCGACAGCAACGGCACAAACGCGCT
CGCGGTATCCACGGCTAATTTGTCGCTAAATTCCAGCGACGCGAAGACGGAGCAGAACAC
GACGACGCAGTCTAATTTGTCACGACAGACACCGGCAGGCTCGGGAGAAACGAGAATGAC
GCCGTTGTTAGGTGTAGCCCCTTTAGGGCCGATTCCCCTTGGAAAAGACAACGTGTATCA
GCAAGCCATGCTCGACGCGTCTTGGAGGCATATGCCGCACCCATCCGACTCGGAGAGATT
GCGGCATTACTTACCGCGCAACCCTTGTCCTACACCGGCCTATTATCACCAGACCCCGCT
CCCGCATCATCATTCTATCGATTTTTATCTCCGGCTATCGACGGAGACGTTATTCTTTAT
ATTTTACTACATGGAGGCGAGCCAGGCGCAGTATTTGGCGGCGAAGGCTTTGAAAAAACA
ATCATGGAGGTTCCACACCAAGTATATGATGTGGTTTCAGAGGCACGAAGAACCCAAAAC
TATTACGGACGAATATGAACAGGGGACGTATATTTACTTTGACTATGAGAAATGGGGACA
GCGGAAAAAAGAGGGATTTACATTCGAATACCGATACCTGGAAGACAGGGAACTTCCGTA

InterProScan

PIRSF
CCR4-NOT_su3/5 (IPR012270) - T[1-562] 1.4E-129 - T[523-719] 3.2E-78
Pfam
Not_N (IPR007207) - T[3-231] 3.0E-86
Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[569-714] 8.2E-66
Pfam
NOT (IPR007282) - T[588-713] 1.8E-40

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT3_HUMAN 62.832 % 313 6.16E-96