- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr6.g58826.01.t
Possible name(s)
ZNF146; ZNF300; ZNF568
Gene model
Location
chr6 [1,645,102 / 1,646,464]
Amino acid sequence
Length: 453
>Boschl.CG.Botznik2013.chr6.g58826.01.p
AASWVLEAILESSTSEDVSLSKLSIQLHGVSAYAISCLLGFIYTGQFPDDILENDEKTQE
VLHAAKLYKMDQITEDLQDKMKKTGDDDVTSNVPVIENGNMSENILENLVEADNDTGLNE
EETVELQEILIDDQILQDNTSEVKLSQDDVKKYVSDNTTYAKEHGILYCVLCSEIFKSQA
DLLIHMNDHKVKHRKQPERAAAASASFIVEQDDDFEDDMDFSIGGSSGKGKSSHKSFACA
ECGSLFSGKSYLIKHYIAQHPGTIFCKYCVQRFDTVEKLETHVLTHKTRETTTVAKTETG
AVKRGRKPRVGPKTYGCTVCSTTFEKRRELLKHREIIHGIFRPLHTCTTCGKQYKEKQSL
VAHTRVHTGERPYMCSYCGNSFSDAKTWKDHERRHRGEKPFLCTTCGKRFTYRQSFTRHM
KFHTGIRPFQCSFCGKSFVLRQNMKEHEKRHNK
Nucleotide sequence
Length: 1,362
>Boschl.CG.Botznik2013.chr6.g58826.01.t
CTGCTTCTTGGGTTTTGGAGGCCATTCTCGAATCCTCAACGTCAGAAGATGTCAGTTTAT
CCAAGCTCTCGATCCAACTGCACGGAGTATCCGCGTACGCGATATCGTGCTTGCTGGGAT
TTATATACACCGGTCAATTTCCTGACGATATCCTCGAGAATGATGAAAAAACACAAGAGG
TGTTGCATGCTGCCAAACTGTATAAAATGGATCAAATCACCGAAGACTTGCAGGACAAAA
TGAAAAAGACAGGAGATGACGACGTGACATCGAATGTTCCTGTGATAGAAAACGGGAATA
TGAGTGAAAATATACTTGAGAATTTAGTGGAAGCAGATAATGATACCGGATTAAATGAAG
AAGAGACTGTGGAGTTACAAGAAATTCTAATAGACGATCAAATTCTGCAAGACAACACCT
CCGAAGTAAAGCTGTCTCAGGATGATGTGAAGAAGTATGTCTCTGACAACACAACATACG
CAAAGGAGCATGGCATCTTATACTGTGTGTTATGCAGTGAAATATTCAAAAGTCAAGCTG
ATCTTCTCATTCATATGAACGACCATAAAGTAAAACATCGTAAGCAGCCCGAGAGAGCTG
CCGCAGCTTCGGCGTCCTTCATAGTCGAACAGGATGATGATTTCGAGGATGACATGGACT
TCTCAATAGGAGGATCGTCCGGGAAAGGCAAATCTTCCCACAAATCATTCGCGTGCGCCG
AATGCGGTTCGTTATTCAGCGGTAAATCATACTTGATAAAGCATTATATCGCGCAGCACC
CTGGTACAATATTTTGTAAATATTGTGTGCAGCGTTTTGATACGGTTGAAAAACTGGAAA
CTCACGTCTTGACGCATAAGACACGGGAAACGACTACCGTAGCAAAAACCGAAACTGGTG
CTGTAAAGAGAGGTAGGAAACCCAGAGTTGGCCCGAAGACTTACGGATGCACCGTTTGTT
CGACAACATTCGAGAAACGCAGAGAGCTGCTCAAACACCGGGAAATAATCCACGGAATTT
TCCGACCATTGCACACGTGCACCACGTGCGGAAAACAGTATAAAGAAAAACAAAGTTTGG
TGGCGCATACACGTGTGCACACTGGCGAAAGACCTTACATGTGCTCGTATTGCGGTAATT
CATTCTCCGACGCCAAAACTTGGAAAGACCACGAGAGGCGGCATCGCGGAGAGAAACCGT
TTCTGTGTACCACTTGCGGAAAACGCTTCACGTACCGACAGTCGTTTACGAGGCACATGA
AGTTTCACACGGGGATACGTCCGTTCCAGTGCTCGTTTTGCGGAAAGTCGTTTGTTCTGC
GGCAGAACATGAAGGAACACGAAAAGAGACACAATAAGTGAT
| Pfam |
BTB/POZ_dom (IPR000210) - T[1-83] 7.3E-7 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[2-83] 1.18E-6 |
| SMART |
Znf_C2H2_type (IPR013087) - T[167-189] 0.32 - T[237-260] 0.49 - T[264-286] 0.72 - T[315-338] 0.14 - T[345-367] 0.026 - T[373-395] 0.016 - T[401-423] 0.012 - T[429-451] 0.0013 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[168-189] 1.96E-6 - T[232-256] 1.96E-6 - T[265-334] 9.88E-5 - T[354-410] 2.93E-18 - T[395-447] 4.0E-17 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[169-189] . - T[239-260] . - T[266-286] . - T[317-338] . - T[347-367] . - T[375-395] . - T[403-423] . - T[431-451] . |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[237-262] 10.346 - T[315-343] 11.115 - T[345-372] 15.542 - T[373-400] 14.233 - T[401-428] 15.105 - T[429-453] 12.258 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OZF_HUMAN | 31.392 % | 141 | 1.33E-38 |
| ZN300_HUMAN | 31.818 % | 149 | 3.02E-39 |
| ZN568_HUMAN | 32.646 % | 146 | 3.4E-38 |