- Transcript 'Moocci.CG.ELv1_2.S59...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr6.g58350.01.t
Possible name(s)
SHMT1; SHMT2
Gene model
Location
chr6 [3,545,327 / 3,550,826]
Amino acid sequence
Length: 427
>Boschl.CG.Botznik2013.chr6.g58350.01.p
SDSNGCYIISITLTPLDSHPFLYFRYYGGAEHIDELERLCQKRAREVFKLDADKWSVNVQ
PYSGSPANFAVFTAIVQPHGRIMGLDLPDGGHLTHGFMTDKKKVSATSIFFESMPYKVHQ
DTGYIDYDRLAENAKLFKPKVIIAGVSCYSRHLDYKRMKEIADENNAYLMADMAHISGLV
AAGIVPSPFEHCDIVTTTTHKTLRGPRSGMIFCRKGVRKVTAAGKEEMYNLEKPINEAVF
PGLQGGPHNHAIGGVAVALKQAMTEEFIADQKQTIANARHMAKLLVDRGFNVVTGGTDNH
LMLVNLKNKGTDGNRADKTLEAIGIACNKNSCPGDTSALRPSGLRLGTPALTSRGFKEQD
FDKVVDLIDRAVQLTLDIQNSLEPKAPFKDFKDKLYKDPKFVEEVKALKGEVSAFASRFP
MPGLPTL
Nucleotide sequence
Length: 1,285
>Boschl.CG.Botznik2013.chr6.g58350.01.t
GTTCCGATTCCAATGGGTGTTACATAATTTCTATAACTCTGACTCCGCTTGACTCGCATC
CCTTCTTGTATTTCAGATATTATGGCGGTGCGGAACACATCGACGAACTGGAGCGTCTAT
GTCAGAAAAGAGCTCGTGAAGTTTTCAAATTAGATGCTGATAAATGGAGCGTTAATGTAC
AACCTTACTCTGGGTCGCCTGCTAACTTTGCAGTGTTTACAGCGATTGTACAACCTCACG
GCAGAATAATGGGACTGGATCTGCCCGACGGCGGTCACCTGACTCACGGATTTATGACGG
ACAAAAAGAAAGTGTCGGCGACTTCCATATTTTTTGAATCGATGCCATACAAGGTTCACC
AAGACACTGGCTACATCGATTACGACAGATTAGCGGAAAACGCGAAGCTCTTCAAGCCGA
AGGTTATTATCGCAGGAGTGAGCTGCTACTCTAGGCATTTGGACTACAGGAGAATGAAGG
AGATTGCTGATGAGAACAACGCATACCTCATGGCTGATATGGCTCATATAAGTGGCCTGG
TCGCTGCCGGCATTGTTCCATCTCCGTTCGAGCACTGCGACATCGTTACGACCACGACTC
ATAAGACTCTTCGCGGCCCACGCTCCGGAATGATTTTCTGCCGAAAAGGCGTACGCAAAG
TGACAGCCGCCGGTAAAGAAGAGATGTACAACCTGGAGAAGCCGATCAACGAAGCTGTGT
TTCCTGGACTGCAGGGAGGACCGCACAACCACGCGATTGGCGGGGTGGCTGTCGCGCTCA
AGCAGGCCATGACCGAGGAATTCATTGCCGACCAGAAACAGACTATTGCTAACGCAAGAC
ACATGGCCAAATTGCTCGTGGACCGGGGATTCAACGTCGTAACCGGCGGTACCGATAACC
ACCTCATGCTCGTCAATTTGAAGAATAAGGGTACCGACGGGAACAGAGCCGACAAGACTT
TGGAGGCAATCGGTATCGCGTGCAATAAAAACTCTTGCCCCGGGGACACGTCAGCGTTGA
GGCCCAGCGGATTGCGGCTCGGCACTCCGGCGTTGACCTCGAGAGGTTTCAAGGAGCAGG
ACTTCGATAAAGTTGTTGATTTGATAGACCGCGCCGTGCAATTGACGTTGGACATACAGA
ATTCGTTGGAGCCCAAAGCCCCTTTCAAGGACTTCAAGGACAAGCTCTACAAGGACCCCA
AATTTGTGGAGGAAGTCAAAGCTCTTAAAGGAGAAGTGTCGGCGTTCGCTTCGAGATTTC
CTATGCCAGGATTGCCTACATTGTG
| PIRSF |
Ser_HO-MeTrfase (IPR001085) - T[11-426] 2.3E-150 |
| Gene3D |
PyrdxlP-dep_Trfase_major (IPR015421) - T[24-272] 4.1E-183 |
| SUPERFAMILY |
PyrdxlP-dep_Trfase (IPR015424) - T[25-423] 8.41E-157 |
| CDD |
Ser_HO-MeTrfase (IPR001085) - T[25-391] 0.0 |
| ProSitePatterns |
Ser_HO-MeTrfase_PLP_BS (IPR019798) - T[193-209] . |
| Gene3D |
PyrdxlP-dep_Trfase_dom1 (IPR015422) - T[273-422] 4.1E-183 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLYC_HUMAN | 70.896 % | 578 | 0 |
| GLYM_HUMAN | 61.097 % | 511 | 5.46E-180 |