- Transcript 'KH2012:KH.C1.105.v1....' >
- Transcript 'KH2012:KH.C1.1031.v1...' >
- Transcript 'KH2012:KH.C1.1045.v1...' >
- Transcript 'KH2012:KH.C1.1036.v1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr6.g55108.01.t
Possible name(s)
AHI1; WDR44; WDR5
Gene model
Location
chr6 [4,142,998 / 4,149,079]
Amino acid sequence
Length: 377
>Boschl.CG.Botznik2013.chr6.g55108.01.p
MRIKYDSKDDVLGPQEMMPQARAYSGNDDVFSSPVHSQERNAMDDDEDTSPFRQVPFSSY
VGHSADVLDLAWSKNYFVLSSSMDKRVRLWHISRKECLCCFQHIDFVTAIAFHPRDDRYF
LSGSLDSKLRLWNIPDKKVALWNEVSPEGSSASSNANGSSGALITTVNFCENGKFAVCGT
YDGRCVFFDTEHLKYHTQIHVRSSRGRNNKGHKVTGIEPLPGEHKILVTSNDSRVRLYDL
RDLSLVCKYRGHANMSSQIKASFSPDSKYIVCGSEDKCVYIWKTTLPQDIKLSSLRRDRN
DAWESMKAHDAVVTCAVFAPQPSLLYKSVAAEAMDTKRKTKSASILSLKAKKPQPEEVNV
IISADFNGVIKVTVCAE
Nucleotide sequence
Length: 1,134
>Boschl.CG.Botznik2013.chr6.g55108.01.t
TGCGTATCAAGTACGACAGCAAAGGTGATGTTCTGGGGCCGCAGGAAATGATGCCCCAAG
CCAGAGCGTATTCTGGCAATGACGACGTTTTTTCGAGTCCCGTTCACAGTCAGGAACGTA
ACGCGATGGATGATGATGAAGATACATCGCCGTTTAGACAGGTTCCTTTTTCCTCTTACG
TCGGACATTCCGCCGATGTATTGGACCTGGCGTGGTCAAAGGATTATTTTGTCCTTTCTT
CTTCAATGGATAAGAGGGTCCGGTTATGGCACATTTCGCGGAAAGAATGCCTCTGCTGTT
TTCAACATATCGATTTTGTTACTGCCATCGCTTTTCATCCGAGGGATGACCGATACTTTT
TAAGCGGATCGTTAGATAGTAAACTCAGACTGTGGAATATTCCCGACAAAAAAGTCGCGT
TATGGAACGAAGTCTCCCCGGAGGGATCTTCCGCGGCATCCAACGCAAACGGAAGCAGCG
GCGCTCTAATAACCACGGTGAATTTCTGCGAAAACGGCAAGTTTGCCGTGTGCGGCACGT
ACGACGGGAGATGCGTATTCTTCGATACCGAGGACTTAAAATATCATACGCAAATCCACG
TGCGTTCTTCAAGGGGCCGAAATAACAAAGGGCATAAAGTCACGGGCATCGAACCGTTAC
CGGGAGAACATAAAATCTTGGTGACTTCAAACGATTCTCGAGTTCGTTTATATGACTTAC
GAGACCTGTCGCTGGTGTGCAAGTACAGAGGACACGCCAACATGAGCAGTCAGATTAAAG
CGAGCTTCAGGCCCGATTCGAAATACATCGTCTGCGGTTCGGAAGACAAGTGCGTGTACA
TCTGGAAGACGACTCTGCCTCAAGATATCAAGTTGTCGTCTCTTAGAAGAGATCGGAACG
ACGCTTGGGAAAGCATGAAAGGTCACGACGCCGTCGTGACGTGCGCCGTGTTCGCTCCGC
AGCCCAGCCTCCTTTACAAGAGCGTGGCTGCCGAAGCGATGGATACAAAGCGCAAAACGA
AATCTGCCTCGATTCTTTCTTTGAAAGCTAAAAAACCTCAGCCCGAAGAAGTGAACGTAA
TCATATCCGCTGATTTCAACGGCGTCATCAAAGTGACGGTGTGCGCGGAATGAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[38-339] 1.6E-53 |
| SMART |
WD40_repeat (IPR001680) - T[53-91] 7.8E-6 - T[94-133] 7.0E-8 - T[149-189] 12.0 - T[197-239] 7.9 - T[242-283] 1.2E-4 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[56-325] 9.73E-47 |
| Pfam |
WD40_repeat (IPR001680) - T[56-90] 1.5E-4 - T[96-133] 0.0019 - T[246-283] 8.2E-6 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[60-93] 11.344 - T[100-134] 11.143 - T[262-283] 8.971 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[60-292] 18.299 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AHI1_HUMAN | 26.241 % | 93.6 | 1.47E-20 |
| WDR5_HUMAN | 28.125 % | 85.1 | 2.0E-18 |
| WDR44_HUMAN | 66.467 % | 458 | 8.16E-155 |