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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S56...' > 
  2. Clone 'AHC0AAA148YO24' > 
  3. Transcript 'KH2012:KH.C14.220.v1...' > 
  4. Transcript 'KH2012:KH.C14.220.v2...' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g71775.01.t

Possible name(s)

BBS2; BBS7

Gene model

Boschl.CG.Botznik2013.chr5.g71775

Location

chr5 [2,567,372 / 2,572,148]

Sequences

Amino acid sequence

Length: 569

>Boschl.CG.Botznik2013.chr5.g71775.01.p
MKPSFNFKLNHKVYPRTVTVGKYDGEHTCLTAATTAGKVIIHNPHSKSVGGDRITVEGSG
ISLLNINQAITSLCAGRLDGDDKRDVLAIGTATNLLLYDIHNNKDLFYKDVPDGVNTMQI
GRLGDIDTPLVIVGGNCTLQGFDFNGDDRYWTVTGDNVSSLALVDYTGTGKNRLVVGSED
YDIRVFQEDEIISEISENDVVTMLSSIDGSKYGYSLANGTVGVYDRTARYWRVKSKSQVT
AMHRFDVNGDGVPELITGWSNGKIDVRNPKTGDVLYKDTMSSAVAGIVDAEYRMDGKVQL
ICVSVDGEVKGYDPIVGKAAESILDTAKAQGELRELNQLKQSLALEMQNYEAERASEKSS
ALVSPSEKSMAGMIPINTELKTKFLIARDSETNSPHIKLVITTTAEDVVIRMATVFAEGI
FEGESIVIHPAPNKVSPSIEVPLLPIKDVEVELHIKAYIGPRNSQSFHVYEVTRNLPKYC
MYSYVPTALPKPSGNVTFALNERLPRILLWLNKAFLLLDDEGDIINISVADESKDFDVNF
ILLRGGGSIVLNFAVGGLGAIRIYSINSL

Nucleotide sequence

Length: 1,710

>Boschl.CG.Botznik2013.chr5.g71775.01.t
TGAAACCGTCGTTCAATTTCAAATTAAACCATAAGGTCTATCCGCGTACTGTAACGGTCG
GGAAATATGACGGCGAGCATACTTGCCTCACTGCCGCCACCACCGCAGGAAAGGTGATTA
TTCATAATCCGCACTCGAAATCTGTTGGAGGGGACCGAATCACTGTGGAAGGAAGTGGCA
TAAGCCTTCTGAATATAAATCAAGCAATCACATCTTTGTGTGCAGGTCGGCTTGACGGCG
ACGACAAGCGGGATGTGCTTGCGATCGGCACTGCCACCAATTTACTGCTTTATGACATTC
ACAATAACAAAGATTTGTTCTATAAGGATGTTCCTGATGGTGTGAACACCATGCAGATCG
GAAGGCTAGGGGATATCGACACACCGCTTGTTATTGTGGGGGGAAATTGCACGTTGCAAG
GGTTTGATTTCAACGGCGATGACAGGTACTGGACTGTCACAGGTGATAATGTCAGTTCTT
TGGCACTTGTGGATTACACCGGTACTGGGAAAAACAGACTTGTGGTAGGATCTGAGGACT
ACGATATCAGAGTGTTCCAGGAAGATGAAATCATATCCGAGATCTCCGAAAATGATGTCG
TCACCATGCTGTCTTCAATCGATGGCAGTAAATATGGGTATTCTCTTGCAAATGGAACTG
TGGGAGTGTATGACCGGACAGCCAGGTATTGGAGAGTGAAGTCAAAAAGCCAAGTGACTG
CGATGCACCGCTTCGATGTTAACGGGGACGGCGTGCCTGAACTGATAACCGGATGGTCGA
ACGGAAAGATCGACGTCAGAAACCCCAAAACGGGAGACGTCCTGTATAAAGACACAATGT
CGAGCGCCGTGGCCGGGATTGTGGATGCGGAATACAGGATGGACGGGAAAGTGCAACTTA
TCTGCGTGTCGGTCGACGGCGAAGTCAAAGGATACGACCCCATCGTGGGAAAGGCCGCCG
AATCAATCCTCGACACCGCCAAAGCACAGGGGGAGTTACGCGAATTGAATCAGCTGAAGC
AGAGTCTGGCGCTTGAAATGCAAAACTACGAGGCGGAGAGAGCGTCTGAAAAATCGTCAG
CGTTGGTATCGCCATCGGAGAAGTCTATGGCTGGCATGATTCCAATCAACACCGAGCTTA
AGACCAAATTTCTCATCGCTCGAGATAGCGAGACGAATTCACCGCACATCAAACTGGTGA
TAACTACTACCGCCGAAGATGTCGTCATTAGAATGGCAACGGTATTCGCGGAAGGGATTT
TCGAAGGTGAAAGCATCGTCATTCATCCTGCTCCGAACAAAGTGTCACCCTCAATAGAAG
TCCCTCTGCTTCCGATAAAAGACGTAGAAGTGGAACTTCACATTAAGGCATATATTGGAC
CGAGGAACTCGCAATCATTTCATGTATACGAAGTCACGAGGAAGCTGCCGAAGTACTGCA
TGTACTCTTACGTACCGACTGCCCTGCCGAAGCCAAGCGGTAACGTCACCTTCGCCCTGA
ACGAGCGACTGCCGCGCATCCTACTTTGGCTCAACAAAGCGTTTTTGCTGTTGGACGACG
AAGGCGACATCATCAACATCAGTGTTGCGGATGAGAGCAAGGATTTCGATGTGAACTTCA
TTCTCTTGAGAGGAGGCGGATCTATCGTCCTGAATTTTGCTGTTGGCGGGCTGGGAGCAA
TTCGAATCTATTCGATTAACTCCCTATGAC

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[10-355] 1.4E-8
Pfam
BBS2_N (IPR029430) - T[19-121] 1.3E-39
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[23-316] 7.33E-14
Pfam
BBS2_Mid (IPR029429) - T[160-267] 8.0E-42
Pfam
BBS2_C (IPR029333) - T[271-563] 9.7E-79

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BBS2_HUMAN 49.286 % 572 0